DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment car and AgaP_AGAP003980

DIOPT Version :9

Sequence 1:NP_001259707.1 Gene:car / 32947 FlyBaseID:FBgn0000257 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_318430.3 Gene:AgaP_AGAP003980 / 1278798 VectorBaseID:AGAP003980 Length:574 Species:Anopheles gambiae


Alignment Length:638 Identity:139/638 - (21%)
Similarity:242/638 - (37%) Gaps:161/638 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GSKVIVLDETMIGPLDLVTRPKLFADRGIRLLALKPELHLPREVANV-----------VYVMRP- 86
            |.|::::|...|..:.:.     ||...:    |:.|:.|...:.:|           :..:|| 
Mosquito    21 GMKILMMDRETISIVSMA-----FAQSEM----LQKEVFLFERLDSVRSNEKLKYLKCIVFIRPT 76

  Fly    87 --RVALMEQLAAHVKAGGRAAAGRQYHILFA---PRRSCLCVSQLEVSGVLGSFGNIEELAWNYL 146
              .:.:::|.....|.|       .|:|.|:   ||.....:::.:....:..|   :|:..:||
Mosquito    77 KDNIFMLQQELQSPKFG-------SYYIYFSNIIPRTDIKILAESDEGESVQDF---KEIYADYL 131

  Fly   147 PLDVDLVSMEMPNAFRDVSVDGDTSSLYQAAVGLVQLQRLYGRIPKI-YGKGE-----FAHRVWE 205
            |::.:|.|:.:|...:.:|  .:..:|.::..|||.:...:...|.| |..|.     .|.:|.|
Mosquito   132 PVNPNLFSLHIPTCLQALS--WNPEALERSTQGLVSVLLSFKFRPAIRYRAGSTAAQTLAKKVHE 194

  Fly   206 HAKQLGRDERTLYN----GDKGVVDQLILLDRSIDLLSPLATQLTYEGLIDEFYGIRQNKLTLP- 265
            ...:    |..|::    .|......|::|||..|.::||..|.||:.::.|...|.:.::.|. 
Mosquito   195 TINK----ETALFSFRPPEDGAAPPLLLILDRRDDPITPLLNQWTYQAMVHELLSINKQRVDLSR 255

  Fly   266 AENFPSDGALPGGGGSGPRVEESQSLLGDTEKKTILLHSGEQLYAELRNKHFNEVTKLLARKARE 330
            ....|.|                       .|:.:|....::.||.....:|.|:...:  |...
Mosquito   256 VAGVPKD-----------------------LKEVVLSTEQDEFYANNLYANFGEIATTI--KVLM 295

  Fly   331 IHVQMHATSQDK--SVQEIKSFVENLLPQLMAQKKATSEHTAIAGLLHEQVNAVRFADDLAAEQE 393
            ...|..|..|.|  |:.::|:|||. .||........::|..:...|..||...:..:....|||
Mosquito   296 DEFQKKANDQRKIESIADMKNFVET-YPQFRKMSGTVTKHLVLISELSVQVGQQQLFEVSELEQE 359

  Fly   394 FMVCADIDKPSAYIEDLIACR----VELNRVLRLICM-QCHAASGFKEKLL--NHYKRELVHVYG 451
                             ||||    .:|.||.||:.. :..||:..:..||  ..|:|.      
Mosquito   360 -----------------IACRADHSTQLQRVKRLVSEGKISAANALRLVLLYAMRYERH------ 401

  Fly   452 LEVLLTISNLEKSGLL----------HLQTESRAY--SVLRKTLHLTV--DDNVEIEP---KDIS 499
                   :|.:.||||          |:......|  :|.|:.|..||  .|.|::..   |::.
Mosquito   402 -------ANCDTSGLLKLLQDRGGRSHIVPRMLEYISTVARQELFNTVKITDAVKLTRNLIKELK 459

  Fly   500 YVHSFYAPLTARIVEHSLKPLGWQTLKSQINNLPGPTFEDFQAQLVGIGGRHTVTTVSEGSLLNV 564
            .|.:.||       :|.....|  ||:..|...|    .|.|..::|          :|......
Mosquito   460 GVENVYA-------QHECVLKG--TLEEVIKGRP----LDAQYPIMG----------NEVPFRRP 501

  Fly   565 PRVVLVCFVGGCTFAEIAALRFLAAQEDNNVEFLIATTKVVNKHSFLDSLMSS 617
            |..|:|..|||.|:.|..|:.   .........::..|.:.|..||::.::::
Mosquito   502 PAEVIVFIVGGATYEEALAVH---RYNQEGYRIVLGGTTIHNSESFIEEVLAA 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
carNP_001259707.1 Sec1 36..606 CDD:279352 135/623 (22%)
AgaP_AGAP003980XP_318430.3 Sec1 23..541 CDD:279352 135/624 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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