DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip84 and tubgcp3

DIOPT Version :9

Sequence 1:NP_728264.1 Gene:Grip84 / 32946 FlyBaseID:FBgn0026430 Length:926 Species:Drosophila melanogaster
Sequence 2:XP_005171052.1 Gene:tubgcp3 / 563517 ZFINID:ZDB-GENE-030616-538 Length:906 Species:Danio rerio


Alignment Length:987 Identity:218/987 - (22%)
Similarity:377/987 - (38%) Gaps:279/987 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLANLISESQSPLTPESIIREFRATSDRRLPACDLIKVLVSISEKRPNFAEVTKEISHILQNKDP 74
            :|..|:|..:.|..|..           |:|.|....:|   ::..|.....|           |
Zfish    93 ILYLLLSLCEDPRKPSG-----------RVPVCSYGALL---AQALPRDVHST-----------P 132

  Fly    75 MYAL------LVFVERYSECKPVSESSSSTSLSAMGLPHGNKTSDVNSAAGSVPTTLAIASTSTI 133
            .|..      |.:.||.:...  :.|.:::.:|:||:      ..:|....:.|:.|..|.|..:
Zfish   133 FYYARPQSLPLSYPERSATAH--NSSMATSGISSMGV------FSINGPGPTPPSLLTGAGTQAV 189

  Fly   134 LTTSQNVSGSTRLSLTQSQDFP-TSTPVNCKKATESDTTPVVFVRRGPMDRNR--GAGKDERNDL 195
               .:::.|| ||:.|    .| :|:|.....|....:.|.......|:.|.|  |.|..:..:.
Zfish   190 ---GESMRGS-RLAWT----LPVSSSPSGAAAAPRPPSGPSSSPAPKPLQRPRRDGDGSADIGEA 246

  Fly   196 SVIKERVLNAVSDQSLSGYRSVTNKTGN--SPKSMPNDLVTLTDVPDEYRTHLLWEYYKVDGDKV 258
            :::::         .|..::.:..|...  ||::.                      ||:| .||
Zfish   247 ALVRD---------ILYVFQGIDGKFIKMCSPENC----------------------YKID-SKV 279

  Fly   259 PRAEIAAMPLLSQESMLLDEL--LHCLTGIRESLLVPQKPIISAVGLAKYDTDFDIHTHLDRSLT 321
            |..:     .|...|..|.||  ||  ..||                 ||.   |.|: |||:  
Zfish   280 PLCK-----SLRDTSSRLAELGWLH--NKIR-----------------KYT---DSHS-LDRA-- 314

  Fly   322 HQVREILPLASYFMGVQKIIAATDGLGQVMNSLNEALQELTHDFY--LIIVQAEQELRHNR---- 380
                                     .|.|..|...||.:...::|  |.::.|:.::..::    
Zfish   315 -------------------------FGLVGQSFCAALHQELKEYYRLLSVLHAQLQVEDDQGVNM 354

  Fly   381 -----LTLQKLLYYLQPTMWVMHEVWS----------SLVIIQLSDSRDAEVLTYLHERIKRLEG 430
                 |||::||            ||:          :.::......:..|:.|.:|...|..:.
Zfish   355 SVDSSLTLRRLL------------VWTYDPKVRLKTLAALVDYCQGRKGGELATAVHAYGKTGDP 407

  Fly   431 NKDAQ-QLIIGLVRKAAKPYMRMLQMWIQKGVIVDRHREFLVVDNEVIHRDELPEHYSDDYWERR 494
            |..|. |.|:|||   :.|.:..|..||..|.:.|.:.||.|..:..:..|.|        |..:
Zfish   408 NMRALIQHILGLV---SHPILNFLYRWIYDGELEDTYHEFFVASDPTVKTDRL--------WHDK 461

  Fly   495 YTLRDEQIPSFLA-KYSDKILRTGKYLNVIRQ-CGKR-----VMPTQ----------EMNLEFDP 542
            |:||...||||:. ..:.|:|..||.:|.:.| |..|     :||..          |:..:.:.
Zfish   462 YSLRKSMIPSFITMDQARKVLLIGKSINFLHQVCHDRTPPGKIMPASKSKDSPKDAAELFTDLEG 526

  Fly   543 TSERHVSVINDAYYFAARMLLDVLLTENDLMGHLQSVKRYLLLNQGDFTMQFMDACEDELTKNVD 607
            |.:   |.|:.||:..::.|||||.....|:.|||:::|||||.||||....||..:.||.:...
Zfish   527 TFQ---SKIDAAYFETSKYLLDVLNKNYQLLEHLQAMRRYLLLGQGDFIRHLMDLLKPELARPAT 588

  Fly   608 HVLPMTLENLLGLTLRISSARNDPYKDDLHCELLPYDLVTQMSKIMKKEENWQAQPRLDL----- 667
            .:....|..:|...:|.::|:.|                  ..:|:|         |||:     
Zfish   589 TLYQHNLTGILETAVRATNAQFD------------------SPEILK---------RLDVRLLEV 626

  Fly   668 ----SGLECFAFTYEVKWPCSLVLNHISISKYQMLFRQLFYCKHVERQLCKIWKE---NSIARQF 725
                :|.:.|:..|.|:.|.:.|.....:|.|..:|..|:..|.:|..|..|||.   |:...:.
Zfish   627 SPGDTGWDVFSLDYHVEGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIWKGQMCNAKLLKS 691

  Fly   726 EPQAASLYRAAFTLRQRMMNAIQNLEYYMMIEIIEPNWHIFIEKMKTVENVDNVLRLHQDFLDSC 790
            .|:.:.:......|...|::.|..::||:..|::|.:|.....|::..:::|:::..|..|||:.
Zfish   692 MPELSGVLHQCHVLASEMVHFIHQMQYYITFEVLECSWDELWNKVQQAQDLDHIIAAHDVFLDTI 756

  Fly   791 LKNCMLTESSHLNRSIFKLCKICLKYCEFIQITQRYFQDA------------ELRSMVRDSADSS 843
            :..|:|..:   |||:....:     ..|.||.:  ||:|            :||....|.....
Zfish   757 ISRCLLDVN---NRSLLNQLR-----AVFDQIIE--FQNAQDTLYRSALEELQLRIQFEDKKRQR 811

  Fly   844 E--------SEQESLHCPQIETPLDPTDTFSERVRRFDLEFTQLLISFLKQINSMAKKNTADCFM 900
            |        :|||:....:::...|.......::|.....:..::..||:.:.:.:.::    ..
Zfish   812 EEMAEWGVTAEQEAEENRRVQEFKDTIPKMCSQLRLLTHFYQGIVQEFLRLLMTCSDES----LQ 872

  Fly   901 NLVHRINFNAFY 912
            .|..|::||..|
Zfish   873 FLSFRLDFNEHY 884

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grip84NP_728264.1 Spc97_Spc98 278..795 CDD:282045 138/569 (24%)
tubgcp3XP_005171052.1 Spc97_Spc98 251..761 CDD:282045 151/649 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D124154at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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