DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip84 and tubgcp4

DIOPT Version :9

Sequence 1:NP_728264.1 Gene:Grip84 / 32946 FlyBaseID:FBgn0026430 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001128602.1 Gene:tubgcp4 / 557155 ZFINID:ZDB-GENE-081022-124 Length:668 Species:Danio rerio


Alignment Length:758 Identity:140/758 - (18%)
Similarity:267/758 - (35%) Gaps:220/758 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 LLDELLHCLTGI---------RESLLVPQ-----KPIISAV--GLAKYDTDF----------DIH 313
            ::.|||..|:|.         |..|.|.|     .|..::|  .|.|..||:          ..|
Zfish     1 MIHELLLALSGYPGTIFTWNKRNGLQVSQDLPFLHPSETSVLNRLCKMGTDYVRFTEFIEQHTGH 65

  Fly   314 THLDRSLTHQVREILPLASYFMGVQKIIAATDGLGQVMNSLNEALQELTHDFYLIIVQAEQELRH 378
            .|.....:.|     |..|...|:. :.|...||..::....:||.:|..:|          |..
Zfish    66 VHQQEHYSSQ-----PSQSGLHGIY-LRAFCTGLHSMLQPYRQALLDLEKEF----------LGD 114

  Fly   379 NRLTLQKLLYYLQPTMWVMHEVWSSLVIIQLSDSRDAEVLTYLHERIKRLEGNKDAQQLIIGLVR 443
            ..|::..:.|.|:....:...|   :|:::...|:.......|....|...|.....::.:..:.
Zfish   115 PHLSISHVNYMLEQFQLLFPSV---MVVVETIKSQKIHGCQILETVYKHSCGGLPPVRMALEKIL 176

  Fly   444 KAAKPYM-RMLQMWIQKGVIVDRHREFLV---------------------------------VDN 474
            ......| :.|..|:..|:::|:..||.|                                 .|.
Zfish   177 AVCHGVMYKQLAAWMLHGLLLDQSEEFFVKQGPSAGGATAAQEEDEEDLGIGGLSGKQLRELQDL 241

  Fly   475 EVIHRDEL--PEHYSDDYWERRYTLRDEQIPSFL-AKYSDKILRTGKYLNVIR-------QCGKR 529
            .:|..:.:  |.       .::::||.|.:||:: .:.::|||..|:.:.:..       :.|..
Zfish   242 RLIEEENMLAPS-------LQQFSLRVEMLPSYIPVRVAEKILFVGESVQMFENHNQSPSRAGSI 299

  Fly   530 VMPTQEM------NLEFDP-----TSERHVSVINDAYYFAARMLLDVLLTENDLMGHLQSVKRYL 583
            :...::|      .|:..|     ..|..|..|...   .|..|..:::.|:||:|.|:.:|.:.
Zfish   300 LKHQEDMFAAELHRLKQQPLFSLVDFENLVDGIRST---VAEHLWTLMVEESDLLGQLKIIKDFF 361

  Fly   584 LLNQGDFTMQFMDACEDELTK----------NV-------------DHVLPMTLENLLGLTLRIS 625
            ||.:|:....|:|..:..|..          ||             |::||     ||.||:   
Zfish   362 LLGRGELYQVFIDLAQHMLKTPPSAVTEHDVNVAFQQAAHKVLLDDDNLLP-----LLHLTI--- 418

  Fly   626 SARNDPYKDDLHCELLPYDLVTQMSKIMKKEEN--------WQAQPR-LDLSGLECFAFTYEVKW 681
                     |.|            .|..|:...        .::.|| ...:|.......|:|:|
Zfish   419 ---------DYH------------GKESKEGSGNREGTTPPQESSPREAPPTGWAALGLAYKVQW 462

  Fly   682 PCSLVLNHISISKYQMLFRQLFYCKHVERQLCKIWKENSIARQFEPQAASLYRAAFTLRQRMMNA 746
            |..::.....:.||.::||.|...:.|:.:|...|......:..:.......:  :.||..|...
Zfish   463 PLHILFTPAVLEKYNVVFRYLLSVRRVQSELQHCWALQMQRKHLKSNQTDAVK--WRLRNHMAFL 525

  Fly   747 IQNLEYYMMIEIIEPNWHIFIEKMKTVENVDNVLRLHQDFLDSCLKNCMLTESSHLNRSIF---- 807
            :.||:||:.::::|..:...::::.:..:.:::...|..||.:     :|.:|..|.:.:|    
Zfish   526 VDNLQYYLQVDVLESQFSQLLQQINSTRDFESIRLAHDHFLSN-----LLAQSFILLKPVFHCLN 585

  Fly   808 KLCKICLKYCEFIQITQRYFQDAELRSMVRDSADSSESEQESLHCPQIETPLDPTDTFSERVRRF 872
            ::..:|..:|..:             |....|.|...:.|..:                 .|:.|
Zfish   586 EILDLCHNFCSLV-------------SQNLGSLDERGTAQLDI-----------------LVKGF 620

  Fly   873 DLEFTQLLISFL--KQINSMAKKNTADCFMNLVHRINFNAFYT 913
            ..:      |||  |.::|:...........|:.|:::|.:||
Zfish   621 SRQ------SFLLFKILSSVRNHQINSDLAQLLLRLDYNKYYT 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grip84NP_728264.1 Spc97_Spc98 278..795 CDD:282045 118/629 (19%)
tubgcp4NP_001128602.1 Spc97_Spc98 4..574 CDD:282045 119/634 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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