DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grip84 and Grip91

DIOPT Version :9

Sequence 1:NP_728264.1 Gene:Grip84 / 32946 FlyBaseID:FBgn0026430 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_524919.2 Gene:Grip91 / 48481 FlyBaseID:FBgn0001612 Length:917 Species:Drosophila melanogaster


Alignment Length:980 Identity:204/980 - (20%)
Similarity:371/980 - (37%) Gaps:275/980 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PHALRGVLANLISESQSPLTPESIIREFRATSDRRLPACDLIKVLVSISEKRPNFAEVTKEISHI 68
            ||....::.:|::     :|..|...:..|:.|.|....:|.::|||    |.|           
  Fly   105 PHMRHSLMTHLLT-----MTDNSDAEKAVASEDPRTQCDNLTQILVS----RLN----------- 149

  Fly    69 LQNKDPMYALLVFVERYSECKPVSESSSSTSLSAMGLPHGNKTSDVNSAAGSVPTTLAIASTSTI 133
                                   |.|||..||:.||:.:||       ..|:...|.|.|.|...
  Fly   150 -----------------------SISSSIASLNEMGVVNGN-------GVGAAAVTGAAAVTGAA 184

  Fly   134 LTTSQNVSGSTRLSLTQSQDFPTSTPVNCKKATESDTTPVVFVRRGPMDRNRGAGK---DERNDL 195
            ..|  ..:..|..:.:.|.|           ||:|.    :.:|:..:.....|.|   :.|:|:
  Fly   185 AVT--GAAAVTGAAASHSYD-----------ATQSS----IGLRKQSLPNYLDATKMLPESRHDI 232

  Fly   196 SVIKERVLNAVSDQSLSGYRSVTNKTGNSPKSMPNDLVTLTDVPDEYRTHLLWEYYKVDGDKVPR 260
                  |::|           :.:.||...|.:..|:||              ..:|:|...:  
  Fly   233 ------VMSA-----------IYSFTGVQGKYLKKDVVT--------------GRFKLDQQNI-- 264

  Fly   261 AEIAAMPLLSQESMLLDELLHCLTGIRESLLVPQKPIISAVGLAKYDTDFDIHTHLDRSLTHQVR 325
                ......|..|||.                    :|.:|          :.| ||.:.    
  Fly   265 ----KFLTTGQAGMLLR--------------------LSELG----------YYH-DRVVK---- 290

  Fly   326 EILPLASYFMGVQKIIAATDGLGQVMNSLNEALQELTHDFYLIIVQAEQELRHNR---------- 380
                    |..|.....|...:||.:.|   .|:|...:|:..:.....|::..|          
  Fly   291 --------FSDVSTGFNAIGSMGQALIS---KLKEELANFHGQVAMLHDEMQRFRQASVNGIANK 344

  Fly   381 ------------LTLQKLL-YYLQPTMWVMHEV-WSSLVIIQLSDSRDAEVLTYLHERIKRLEGN 431
                        :||.||| :|::|    :|.: |.:.:.......:..::.:.:::.:.  .||
  Fly   345 GKKDSGPDAGDEMTLFKLLAWYIKP----LHRMQWLTKIADACQVKKGGDLASTVYDFLD--NGN 403

  Fly   432 KDAQQLIIGLVRKAAKPYMRMLQMWIQKGVIVDRHREFLVVDNEVIHRDELPEHYSDDYWERRYT 496
            ....:|:..|:.....|.:||:..||.:|.|.|.||||.|...:.:..|.|        |..::.
  Fly   404 DMVNKLVEDLLTAICGPLVRMISKWILEGGISDMHREFFVKSIKDVGVDRL--------WHDKFR 460

  Fly   497 LRDEQIPSFL-AKYSDKILRTGKYLNVIRQ-CGKRVMPTQEMNL------------EFDPTSERH 547
            ||...:|.|: ...::|||.|||.:|.:|: |.::.|..:...|            .:.|.:..|
  Fly   461 LRLPMLPKFVPMDMANKILMTGKSINFLREICEEQGMMKERDELMKVMESSASQIFSYTPDTSWH 525

  Fly   548 VSVINDAYYFAARMLLDVLLTENDLMGHLQSVKRYLLLNQGDFTMQFMDACEDELTKNVDHVLPM 612
            .:| ...|...::.:||:::..:.|:.||..::|||||.||||....::..::||.:....:...
  Fly   526 AAV-ETCYQQTSKHVLDIMVGPHKLLDHLHGMRRYLLLGQGDFISILIENMKNELERPGLDIYAN 589

  Fly   613 TLENLLGLTLRISSAR-NDPYKDDLHCELLPYDLVTQMSKIMKKEENWQAQPRLDLSGLECFAFT 676
            .|.::|...||.::|: :||            |::..:..|:::..|...       |....:..
  Fly   590 DLTSMLDSALRCTNAQYDDP------------DILNHLDVIVQRPFNGDI-------GWNIISLQ 635

  Fly   677 YEVKWPCSLVLNHISISKYQMLFRQLFYCKHVERQL-CKIWKEN-SIARQFEPQAASLYRAAFTL 739
            |.|..|.:.:|.. ::..|::||:.|:..||:|..| .|||||. ..|:......:.:.:|:..|
  Fly   636 YIVHGPLAAMLES-TMPTYKVLFKPLWRMKHMEFVLSMKIWKEQMGNAKALRTMKSEIGKASHRL 699

  Fly   740 R---QRMMNAIQNLEYYMMIEIIEPNWHIFIEKMKTVENVDNVLRLHQDFLDSCLKNCMLTESSH 801
            .   ..:|:.|..::||::.|:||.||....:||:....:|.:|..|:.||.:.|..|.::..:.
  Fly   700 NLFTSEIMHFIHQMQYYVLFEVIECNWVELQKKMQKATTLDEILEAHEKFLQTILVGCFVSNKAS 764

  Fly   802 LNRSI--------------FKLCKICLKYCEFIQITQRYFQDAELRS---------MVRDSADSS 843
            :..|:              ....|.|.|.....:...:..:.:|.:.         :.||.....
  Fly   765 VEHSLEVVYENIIELEKWQSSFYKDCFKELNARKELSKIVEKSEKKGVYGLTNKMILQRDQEAKI 829

  Fly   844 ESEQESLHCPQIETPLDPTDTFSERVRRFDLEFTQLLISFLKQINSMAKKNTADCFMNLV-HRIN 907
            .:|:..:.|..:|.              ...::.:.:.:||..:||....|     :.|. .|::
  Fly   830 FAEKMDIACRGLEV--------------IATDYEKAVSTFLMSLNSSDDPN-----LQLFGTRLD 875

  Fly   908 FNAFY 912
            ||.:|
  Fly   876 FNEYY 880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grip84NP_728264.1 Spc97_Spc98 278..795 CDD:282045 128/560 (23%)
Grip91NP_524919.2 Spc97_Spc98 236..758 CDD:282045 141/633 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455404
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D124154at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19302
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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