DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip84 and Tubgcp3

DIOPT Version :9

Sequence 1:NP_728264.1 Gene:Grip84 / 32946 FlyBaseID:FBgn0026430 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001100793.2 Gene:Tubgcp3 / 306599 RGDID:1305726 Length:902 Species:Rattus norvegicus


Alignment Length:1003 Identity:211/1003 - (21%)
Similarity:381/1003 - (37%) Gaps:231/1003 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LRGVLANLISESQSPLTPESIIREF----RATSDRRLPACDLIKVLVS-------ISEKRPNFAE 60
            |:.:...::..|::     .:.::|    |.......|..:..:.||:       |.::|...|.
  Rat    13 LQNLCCRILGRSEA-----DVAQQFQFAVRVIGSNFAPTVERDEFLVAEKIKKELIRQRREADAA 72

  Fly    61 VTKEISH------ILQNKDPMYALLVFVERYSE--CKPVSESSSSTSLSAMGLPHGNKTSDVNSA 117
            :..|:..      :|:||   :::|..:...||  .|..|:.:|..||.|..||....::....|
  Rat    73 LFSELHRKLHSQGVLKNK---WSILYLLLNLSEDPRKQASKVTSYASLFAQALPRDAHSTPYYCA 134

  Fly   118 AGSVPTTLAIASTSTILTTSQNVSGSTRLSLTQSQDFPTSTPVNCKKATESDTTPVVFVRRGPMD 182
            .   |.||.: :.....|.|....||:.:|..........|||......:|...|          
  Rat   135 R---PQTLPL-NYQDRSTQSSGSLGSSGISSIGMCGLSGPTPVQPFLPGQSHQAP---------- 185

  Fly   183 RNRGAGKDERNDLSVIKERVLNAVSDQSLSGYRSVTNKTGNSPKSMPNDLVTLTDVPDEYRTHLL 247
               |.|...|..|                 |.|.....|||.|...|    |....|:....:|.
  Rat   186 ---GVGDGLRQQL-----------------GPRLAWTLTGNQPSQTP----TSKAFPNALSRNLT 226

  Fly   248 WEYYKVDGDKVPRAEIAAMPLLSQESMLLDELLHCLTGIRESLLVPQKPIISAVGLAKYDTD--- 309
            ..  :.:||....:|:.       |:.|:.::|:...|            |....:....|:   
  Rat   227 RS--RREGDPGGTSEVT-------EAALVRDILYVFQG------------IDGKNIKMSSTENCY 270

  Fly   310 -FDIHTHLDRSLTHQVREILPLASYFMGVQKII---AATDGLGQVMNSLNEALQELTHDFY--LI 368
             .:...:|.:||......:..|......::|..   :.....|.|..|...||.:...::|  |.
  Rat   271 KVEAKANLSKSLRDTAVRLAELGWLHNKIRKYADQRSLDRSFGLVGQSFCAALHQELKEYYRLLS 335

  Fly   369 IVQAEQELRHNR---------LTLQKLLYYLQPTMWVMHEVWS----------SLVIIQLSDSRD 414
            ::.::.:|..::         |||::||            ||:          :.::......:.
  Rat   336 VLHSQLQLEDDQGVNVGLESSLTLRRLL------------VWTYDPKIRLKTLAALVDHCQGRKG 388

  Fly   415 AEVLTYLHERIKRLEGNKDAQQLIIGLVRKAAKPYMRMLQMWIQKGVIVDRHREFLVVDNEVIHR 479
            .|:.:.:|...|  .|:...:.|:..::...:.|.:..|..||..|.:.|.:.||.|..:..:..
  Rat   389 GELASAVHAYTK--TGDPYMKSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVASDPTVKT 451

  Fly   480 DELPEHYSDDYWERRYTLRDEQIPSFLA-KYSDKILRTGKYLNVIRQCGKRVMPTQEM-----NL 538
            |.|        |..:||||...||||:. ..|.|:|..||.:|.:.|......||.:|     :.
  Rat   452 DRL--------WHDKYTLRKSMIPSFITMDQSRKVLLIGKSINFLHQVCHDQTPTTKMIAVTKSA 508

  Fly   539 E--------FDPTSERHVSVINDAYYFAARMLLDVLLTENDLMGHLQSVKRYLLLNQGDFTMQFM 595
            |        |..........|:.||:..::.|||||..:..|:.|:|:::|||||.||||....|
  Rat   509 ESPRDAADLFTDLENAFQGKIDAAYFETSKYLLDVLNRKYSLLEHMQAMRRYLLLGQGDFIRHLM 573

  Fly   596 DACEDELTKNVDHVLPMTLENLLGLTLRISSARNDPYKDDLHCELLPYDLVTQMSKIMKKEENWQ 660
            |..:.||.:....:....|..:|...:|.::|:.|                  ..:|:|      
  Rat   574 DLLKPELVRPATTLYQHNLTGILETAVRATNAQFD------------------SPEILK------ 614

  Fly   661 AQPRLDL---------SGLECFAFTYEVKWPCSLVLNHISISKYQMLFRQLFYCKHVERQLCKIW 716
               |||:         :|.:.|:..|.|..|.:.|.....:|.|..:|..|:..|.:|..|..|.
  Rat   615 ---RLDVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIR 676

  Fly   717 KE---NSIARQFEPQAASLYRAAFTLRQRMMNAIQNLEYYMMIEIIEPNWHIFIEKMKTVENVDN 778
            |.   |:...:..|:.:.:......|...|::.|..::||:..|::|.:|.....:::..:::|:
  Rat   677 KGHMCNAKLLRNMPEFSGVLHQCHILASEMVHFIHQMQYYITFEVLECSWDELWNRVQQAQDLDH 741

  Fly   779 VLRLHQDFLDSCLKNCMLTESSH--LN--RSIF-KLCKI----CLKYCEFIQITQRYFQDAELRS 834
            ::..|:.|||:....|:|..:|.  ||  |::| ::.::    ...|...::..||..|..|.:.
  Rat   742 IIAAHEAFLDTITSRCLLDSNSRVLLNQLRAVFDQIIELQNAQDTMYRAALEELQRRLQFEEKKK 806

  Fly   835 MVRDS-----ADSSESEQESLHCPQIETPLDPTDTFSERVRRFDLEF----TQLLI------SFL 884
            . |::     ..::|.|:|                 ::|:|.|....    :||.|      ..:
  Rat   807 Q-RETEGQWGVTAAEEEEE-----------------NKRIREFQDSIPKMCSQLRILTHFYQGVV 853

  Fly   885 KQINSMAKKNTADCFMNLVHRINFNAFY 912
            :|...:...::.:....|..|::||..|
  Rat   854 QQFLVLLTTSSDESLQFLSFRLDFNEHY 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grip84NP_728264.1 Spc97_Spc98 278..795 CDD:282045 125/570 (22%)
Tubgcp3NP_001100793.2 GCP_N_terminal 246..547 CDD:407574 69/334 (21%)
Spc97_Spc98 550..881 CDD:398000 83/375 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D124154at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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