DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip84 and alp6

DIOPT Version :9

Sequence 1:NP_728264.1 Gene:Grip84 / 32946 FlyBaseID:FBgn0026430 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001342778.1 Gene:alp6 / 2540690 PomBaseID:SPBC428.20c Length:832 Species:Schizosaccharomyces pombe


Alignment Length:1013 Identity:215/1013 - (21%)
Similarity:387/1013 - (38%) Gaps:296/1013 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKPH---ALRGVLANLISESQSPLTP---ESIIREFRATSDRRLP---ACDLIKVLVSISEKRP 56
            ||:.|   ||..:....:..|::|..|   |:|:..|:.......|   ..|:..:|..|..|.|
pombe     1 MSEIHVKTALSRLADKYLQNSKNPSVPYTIETIVSFFQEIIHSISPDTFQLDIDDILYKIYSKIP 65

  Fly    57 N-------FAEVTKEISH-----ILQNKDPMYALLVFVERYSECKPVSESSSSTSL----SAMGL 105
            .       |::::..:|.     ::.||..:...|..:      .|:|:||...|.    .::..
pombe    66 PEENNDALFSKLSNLVSRLKSQTVIHNKSQILYFLYLL------SPISQSSRDVSSHLLDESISN 124

  Fly   106 PHGNKTSDVNSA------AGSVPTTLAIASTSTILTTSQNVS---GSTRLSLTQSQDFPTSTPVN 161
            |....:::|.|:      ...||....|......|....::|   .|:||:              
pombe   125 PINIPSTEVESSNFGQTRYDQVPENPQITDWDEGLENESSISIAHDSSRLN-------------- 175

  Fly   162 CKKATESDTTPVVFVRRGPMDRNRGAGKDERNDLSVIKERVLNAVSDQSLSGYRSVTNKTGNSPK 226
              ::||:.:.....:             .|.:.||.| ..||..:|.:.:               
pombe   176 --RSTETSSVQHTLI-------------TEADLLSSI-SYVLQGISTEYV--------------- 209

  Fly   227 SMPNDLVTLTD-VPDEY--------RTHLLWEYYKV------------DGDKVPRAEIAAMPLLS 270
            ...|:|..|:. :|.:|        .|.||::..||            |||.|.:|      .::
pombe   210 QFKNELALLSKRIPVQYLLQMRALSETGLLYQELKVFSNYDPSVSQSIDGDNVSKA------FIN 268

  Fly   271 QESMLLDELLHCLTGIRESLLVPQKPIISAVGLAKYDTDFDIHTHLDRSLTHQVREILPLASYFM 335
            .:|:.|..|               |.:||     |..|:|   ..|..||..|:|....|....:
pombe   269 DQSLALQSL---------------KSVIS-----KELTNF---LALIASLDSQIRADASLEKPMV 310

  Fly   336 GVQKIIAATDGLGQVMNSLNEALQELTHDFYLIIVQAEQELRHNRLTLQKLLYYLQPTMWVMHEV 400
            .:::.||.|    ||                     |:.:||                      :
pombe   311 TIRRCIAWT----QV---------------------AKLKLR----------------------I 328

  Fly   401 WSSLVIIQLSDSRDAEVLTYLHERIKR--LEGNKDAQQLIIGLVRKAAKPYMRMLQMWIQKGVIV 463
            .||:|    :|:.:.|....|.:.:.:  :.|:...|:|...::.:...|...|::.||.||.:|
pombe   329 LSSVV----NDNMNQENKKRLIQVVSKYNVHGDPLIQELSDKILTEITGPLYEMIENWIYKGELV 389

  Fly   464 DRHREFLVVDNEVIHRDELPEH--YSDDYWERRYTLRDEQIPSFLA-KYSDKILRTGKYLNVIRQ 525
            |.::||.|.:.   :..|..:|  ..|..|:.:|.|..|.|||||: :..|||...||.||..|.
pombe   390 DPYQEFFVKEK---NGSESHDHQGQGDVVWKGKYFLDKELIPSFLSEELVDKIFLIGKSLNFARY 451

  Fly   526 -CGKRVMPTQEMNLEFDPTSERHVSVINDAYY---FAARMLLDVLLTEN------------DLMG 574
             ||           :||...|.:..::....|   .:...::|...||:            .|..
pombe   452 GCG-----------DFDWAQEHYQKLVKKLSYRDPHSLETVVDKAYTESINHLVYLMEEVFHLTD 505

  Fly   575 HLQSVKRYLLLNQGDFTMQFMDACEDELTKNVD----HVLPMTLENLLGLTLRISSARNDPYKDD 635
            ||:::|:||||.||||....|::..:.|.:..:    |.|..:||:    .:|.|:|..:|    
pombe   506 HLKAIKKYLLLGQGDFVDLLMESLGNSLDQPANTLFRHNLTASLES----AIRSSNASYEP---- 562

  Fly   636 LHCELLPYDLVTQMSKIMKKEENWQAQPRLDLSGLECFAFTYEVKWPCSLVLNHISISKYQMLFR 700
               |.:...|..::.::...|..|           :.|...|:|..|.::::......:|..:|.
pombe   563 ---EYVLKRLDARLLELSHGETGW-----------DVFTLEYKVDSPINVIITPYCSRQYLKIFN 613

  Fly   701 QLFYCKHVERQLCKIWK-----ENSIAR-----QFEPQAASLYRAAFTLRQRMMNAIQNLEYYMM 755
            .|:..|.:|..|...|:     |.::.|     :||....|.:.|      .|::.:..|:||::
pombe   614 FLWRLKRIEFALAHSWRRVNLGERNVFRNLDYTKFEWHFVSCHLA------EMIHFVCQLQYYIL 672

  Fly   756 IEIIEPNW---HIFIEKMKTVENVDNVLRLHQDFLDSCLKNCML------TESSHLNRSIFKLCK 811
            .|:||.:|   .:.:||...  .:|..:..|:.::.|.....:|      .|.|.|:: :..:.|
pombe   673 FEVIEISWQELQLAMEKPNA--TLDTYIEAHEKYVTSITHKGLLGGGKSRNEDSFLHQ-LHDILK 734

  Fly   812 ICLKYCEFIQITQRYFQDAELRSMVRDSADSSESEQESLHCPQIETPLDP-TDTFSERVRRFDLE 875
            :.|.:.:.|::...:  ...|.:.:|.:...|.....:.:.| |:..|.. |:.|..|::     
pombe   735 VILNFHDAIELLYNF--SCSLSNRIRINVPISTDALAAQYTP-IKNELSNFTEEFQVRLQ----- 791

  Fly   876 FTQLLISFLKQINSMAK-KNTADCFMNLVHRINFNAFY 912
                     |.::.:|. |:....|:::  |:|:|.||
pombe   792 ---------KLLHGLASHKDPEMRFLSV--RLNYNEFY 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grip84NP_728264.1 Spc97_Spc98 278..795 CDD:282045 126/554 (23%)
alp6NP_001342778.1 Spc97_Spc98 196..713 CDD:309310 147/656 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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