DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip84 and tubgcp2

DIOPT Version :9

Sequence 1:NP_728264.1 Gene:Grip84 / 32946 FlyBaseID:FBgn0026430 Length:926 Species:Drosophila melanogaster
Sequence 2:XP_002940353.2 Gene:tubgcp2 / 100497706 XenbaseID:XB-GENE-490453 Length:896 Species:Xenopus tropicalis


Alignment Length:959 Identity:300/959 - (31%)
Similarity:490/959 - (51%) Gaps:154/959 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLANLISESQSPLTPESI--------IREFRATSDRRLPACDLIKVLVSISEKRPNFAEVTKEIS 66
            |..:|:.::::|....|:        |.||..|.|      |.:|....:..|.           
 Frog    27 VYIDLLQKNRTPYVTTSVSTHSAKVKIAEFSRTPD------DFLKKYEELKSKN----------- 74

  Fly    67 HILQNKDPMYALLVFVERYSECKPVSESSSSTSLSAMGLPHGN--KTSDVNSAAGSVPTTLAIAS 129
              .:|.||:..||        .|.:.:..:...|      |.|  ..:|:.|          |::
 Frog    75 --TRNLDPLVYLL--------SKLIEDKETLQYL------HQNAKDKADLTS----------ISA 113

  Fly   130 TSTILTTSQNVSGSTRLSLTQSQDFPTSTPVNCKKATESDTTPVVFVRRGPMDRNRGAGKDERND 194
            |:..|..:.|.|   ::||.:..:...........|:.| ..||..:|:...|:           
 Frog   114 TAASLPVAPNTS---KISLHELDELRRQLETVTMAASYS-PQPVEVLRKCLRDK----------- 163

  Fly   195 LSVIKERVLNAVSDQSLSGYRSVTNKTGNSPKSMPNDLVTLTDVPDEYRTHLLWEYYK--VDGDK 257
               :|::                  .||:.....|:                 |.|.:  :.||.
 Frog   164 ---LKKK------------------NTGHPVPVFPS-----------------WVYERPALTGDF 190

  Fly   258 VP--------RAEIAAMPLLSQESMLLDELLHCLTGIRESLLVPQKPIISAVGLAKYDTDFDIHT 314
            :|        ...|..:|:.|||:.|:::||:.|.|: :...:..:|::     ......|.:..
 Frog   191 MPFSNSSTDVTVPIGTLPMPSQEACLVEDLLYILIGV-DGRYISVQPLV-----GHQSRTFSVEQ 249

  Fly   315 HLDRSLTHQVREILPLASYFMGVQKIIAATD--GLGQVMNSLNEALQELTHDFYLIIVQAEQELR 377
            :||.|:...|..|||:|:.:..|.:.:....  ..|||.::|..|::.|..::.::|.|.|...|
 Frog   250 NLDMSVKELVNRILPVAANYSTVTRFVEENSLFEYGQVNHALGAAMRTLGKEYMILITQLEHLQR 314

  Fly   378 HNRLTLQKLLYYLQPTMWVMHEVWSSLVIIQLSDSRDAEVLTYLHERIKRLEGNKDAQQLIIGLV 442
            ...|:||||.:|:|||:..|..:.|....:...:......|:.||:|.....|:..||:|.:.|.
 Frog   315 QGLLSLQKLWFYIQPTLRTMEVLASIATSLDKGECLGGATLSLLHDRTFGYTGDNQAQELCLYLT 379

  Fly   443 RKAAKPYMRMLQMWIQKGVIVDRHREFLVVDNEVIHRDELPEHYSDDYWERRYTLRDEQIPSFLA 507
            :.|:.||..:|:.||.:|:|.|.:.||:|.::| :.::::.|.|:|.||::|||:..:||||||.
 Frog   380 KAASAPYFDILERWIYRGIINDPYSEFMVEEHE-LQKEKIQEDYNDKYWDQRYTIVQQQIPSFLQ 443

  Fly   508 KYSDKILRTGKYLNVIRQCGKRVMPTQEMNLEFDPTSERHVSVINDAYYFAARMLLDVLLTENDL 572
            |.:||||.|||||||:|:||..|.......:.:....:.:|..|..||.:|:::|||.|:.|.:|
 Frog   444 KVADKILSTGKYLNVVRECGHDVTCPDAKEITYTLKEQAYVEQIEKAYNYASKVLLDFLMEEKEL 508

  Fly   573 MGHLQSVKRYLLLNQGDFTMQFMDACEDELTKNVDHVLPMTLENLLGLTLRISSARNDPYKDDLH 637
            :.||:|:|.|.|::||||.:.|||..|:||.|.|:.::|..||.||.|.||:|:|..||:||||.
 Frog   509 VAHLRSIKHYFLMDQGDFFVHFMDLTEEELRKPVEDIIPTRLEALLELALRMSTANTDPFKDDLK 573

  Fly   638 CELLPYDLVTQMSKIMKKEENWQ-----AQP-RLDLSGLECFAFTYEVKWPCSLVLNHISISKYQ 696
            .||:|:||:||:.:::..|...:     |.| .|.|||||.|:|.|.||||.||::|..::::||
 Frog   574 IELMPHDLITQLLRVLAIETRQEKALINADPTELALSGLESFSFDYIVKWPLSLIINRKALTRYQ 638

  Fly   697 MLFRQLFYCKHVERQLCKIWKENSIARQFEPQAASLYRAAFTLRQRMMNAIQNLEYYMMIEIIEP 761
            ||||.:||||||||.||.:|..|..|:||...:|..:..||||||||:|.:||::||||.|::||
 Frog   639 MLFRHMFYCKHVERLLCNVWISNKTAKQFSLHSAKWFAGAFTLRQRMLNFVQNIQYYMMFEVMEP 703

  Fly   762 NWHIFIEKMKTVENVDNVLRLHQDFLDSCLKNCMLTESSHLNRSIF-KLCKICLKYCEFIQ-ITQ 824
            .|||..:.:|:..|:|:||..|..|||:|||:||||....|  .|| ||..:|:.:...:| .||
 Frog   704 TWHILEKNLKSASNIDDVLSHHTSFLDNCLKDCMLTNPELL--KIFSKLMSVCVMFTNCLQRFTQ 766

  Fly   825 RYFQDAELRSMVRDSAD----------SSESEQESLHCPQIETPLDPTDT---FSERVRRFDLEF 876
            ......|:.::..:...          :.|:.::.|.....|..:|...:   |...:..||:.|
 Frog   767 SMQVQTEMENLTLEHGTMMGPPTQCERTEEALKKKLTSKYFEEHIDAFPSSFGFESTINNFDINF 831

  Fly   877 TQLLISFLKQINSMAKKNTADC---FMNLVHRINFNAFYTDQMDKMCVE 922
            :..|:..|   :.::..:|:||   .:|:::|::||.|||:::.::..|
 Frog   832 SAHLMDLL---DKLSMYSTSDCEHSMINIIYRLDFNGFYTERLKQLSSE 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grip84NP_728264.1 Spc97_Spc98 278..795 CDD:282045 214/524 (41%)
tubgcp2XP_002940353.2 GCP_N_terminal 217..505 CDD:407574 97/294 (33%)
Spc97_Spc98 508..867 CDD:398000 147/363 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 285 1.000 Domainoid score I1590
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H55980
Inparanoid 1 1.050 478 1.000 Inparanoid score I1441
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D124154at33208
OrthoFinder 1 1.000 - - FOG0005184
OrthoInspector 1 1.000 - - oto103579
Panther 1 1.100 - - LDO PTHR19302
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4216
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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