DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and Pax4

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_113987.1 Gene:Pax4 / 83630 RGDID:620433 Length:349 Species:Rattus norvegicus


Alignment Length:91 Identity:34/91 - (37%)
Similarity:47/91 - (51%) Gaps:11/91 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   503 ASCPTP------ARRRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQVWFQNR 561
            ::|..|      ...|:||.|:..|...||..|.:..|||...|.:||..|.|.|..::|||.||
  Rat   157 SNCEAPRGPHPGTSHRNRTIFSPGQAEALEKEFQRGQYPDSVVRGKLAAATSLPEDTVRVWFSNR 221

  Fly   562 RAKYRKQEK-----QLQKALAPSVIP 582
            |||:|:|||     |:..|....::|
  Rat   222 RAKWRRQEKLKWETQMPGASQDLMVP 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 25/55 (45%)
Pax4NP_113987.1 PAX 5..129 CDD:128645
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 8..64
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 83..131
Homeodomain 172..227 CDD:459649 25/54 (46%)
Transcription repression 278..349
Blue background indicates that the domain is not in the aligned region.

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