DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and Hoxd9

DIOPT Version :9

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_001166940.1 Gene:Hoxd9 / 688999 RGDID:1582908 Length:343 Species:Rattus norvegicus


Alignment Length:371 Identity:89/371 - (23%)
Similarity:125/371 - (33%) Gaps:126/371 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 IGNGP-------SSSGAGTGSVSAAAAAAAAA---AAASSSSSSLPHVAPHSLGLSPQSSADSQQ 306
            :.:||       |.|.|...||.:|:.:|.||   |||:.|....|:|:|     .|.::|:..:
  Rat    42 VADGPAAAAEFASCSFAPKSSVFSASWSAVAAQPPAAATMSGLYHPYVSP-----PPLAAAEPGR 101

  Fly   307 F--------NIFPAIFSRQLNFSAGGQGGKLSMDELRPNLVGGLLGLQQGLLEDHASMQHGGVGQ 363
            :        ..||.        .|||.||.           ||..|              ||.|.
  Rat   102 YVRSWMEPLPGFPG--------GAGGGGGS-----------GGGGG--------------GGSGG 133

  Fly   364 DTKFMSFQDQRLMGIGGSHENRLLSLASSVQDTRSP--ITTLEKSSSSSLNHQRKCSSTPEDFSA 426
            .....|        .||....|...:........:|  .:|...:||||.:.:.:||:..|... 
  Rat   134 PGPVPS--------PGGPANGRHYGIKPETGAAPAPSAASTSSSTSSSSSSKRTECSAARESQG- 189

  Fly   427 LYSGLPT----------------------PGMDSSSHHHTPAHTPPSRLSDHTISAEGAFKKLKP 469
              ||.|.                      ||:...:...|...:.||..|||             
  Rat   190 --SGGPEFPCNSFLRDKAAAAAAAAAGNGPGVGIGTGPGTGGSSEPSACSDH------------- 239

  Fly   470 EPNSGLSTVSAGITSPGSGLSSLSQHAGHTPTTASCP-TPA--------RRRHRTTFTQEQLAEL 525
                         .|||..|....:.....|.....| .||        .|:.|..:|:.|..||
  Rat   240 -------------PSPGCPLKEEEKQPPQPPQQQLDPNNPAANWIHARSTRKKRCPYTKYQTLEL 291

  Fly   526 EAAFAKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEKQ 571
            |..|..:.|.....|.|:||...|.|.::::||||||.|.:|..|:
  Rat   292 EKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMSKE 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeobox 513..566 CDD:278475 21/52 (40%)
Hoxd9NP_001166940.1 Hox9_act 1..>155 CDD:282473 37/158 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..196 29/126 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..267 12/72 (17%)
HOX 276..328 CDD:197696 19/51 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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