Protein Alignment CG32532 and Cdx2

DIOPT Version :10

• Sequence 1: NP_608318.5
• Gene: CG32532 / 32943
• FlyBaseID: FBgn0052532
• Length: 688
• Species: Drosophila melanogaster
• Sequence 2: NP_076453.1
• Gene: Cdx2 / 66019
• RGDID: 621234
• Length: 310
• Species: Rattus norvegicus
• Alignment Length: 278
• Identity: 75/278 - (26%)
• Similarity: 113/278 - (40%)
• Gaps: 58/278 - (20%)

  Fly   354 ASMQHGGVGQDTKFMSF-QDQRLMGIGGSHENRLLSLASSVQDTRSPITTLEKSSSSSLNHQRKC 417
            :|::|.| |.:....:| ...:....||.|.....:.|:::...:||..:...:..:.|.
  Rat    16 SSVRHSG-GLNLAPQNFVSPPQYPDYGGYHVAAAAAAAANLDSAQSPGPSWPTAYGAPLR----- 74

  Fly   418 SSTPEDFS---------------ALYSGLPTPGMDSSS------HHHTPAHTP------PSRLSD 455
                ||::               .|..|.|...|..||      ||| |.|.|      ||
  Rat    75 ----EDWNGYAPGGAAAANAVAHGLNGGSPAAAMGYSSPAEYHAHHH-PHHHPHHPAAAPS---- 130

  Fly   456 HTISAEGAFKKLKPEPNSGLSTVSAGITSPGSGLSSLSQ--HAGHTPTTAS-CPTPARRRHRTTF 517
               .|.|..:.|.|.|....:|.:|...||.....:|.:  .....|:..| ..|..:.::|..:
  Rat   131 ---CASGLLQTLNPGPPGPAATAAAEQLSPSGQRRNLCEWMRKPAQPSLGSQVKTRTKDKYRVVY 192

  Fly   518 TQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRK-------QEKQLQKA 575
            |..|..|||..|..|.|..|..:.|||.|..|:|.::::||||||||.||       |::|.|..
  Rat   193 TDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQQPP 257

  Fly   576 LAPSVIPS--CNGMMRNI 591
            ..|...||  .:|.:|::
  Rat   258 APPPPQPSQPQSGALRSV 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG32532	NP_608318.5	Homeodomain	511..567	CDD:459649	24/55 (44%)
Cdx2	NP_076453.1	Caudal_act	13..178	CDD:461413	39/179 (22%)
		Homeodomain	187..242	CDD:459649	24/54 (44%)