DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and Crx

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_068627.2 Gene:Crx / 60446 RGDID:620511 Length:299 Species:Rattus norvegicus


Alignment Length:178 Identity:58/178 - (32%)
Similarity:86/178 - (48%) Gaps:20/178 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   467 LKPEPNSGLSTVSAGITSPGSGLSSLSQHAGHTPTTASCPTPARRRHRTTFTQEQLAELEAAFAK 531
            :.|.|:..::.::         ||..|....|.....|.....:||.|||||:.||.||||.|||
  Rat     5 MNPGPHYSVNALA---------LSGPSVDLMHQAVPYSSAPRKQRRERTTFTRSQLEELEALFAK 60

  Fly   532 SHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSV 596
            :.|||:|.|||:|....|.|:|:||||:|||||.|:|.:|.::...|.      |:....:....
  Rat    61 TQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQRQQQKQQQQPP------GVQAKARPAKR 119

  Fly   597 SRGYQPYPHHNTMNRYPQDLFQMGASSYPGMTQPFSMAHSTNMGSVGV 644
            ..|..|.|..:...    |...:..|..|.:..| |.:.:|.:.:|.:
  Rat   120 KAGTSPRPSTDVCT----DPLGISDSYSPSLPGP-SGSPTTAVATVSI 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 36/55 (65%)
CrxNP_068627.2 Homeodomain 40..93 CDD:459649 34/52 (65%)
TF_Otx 164..249 CDD:427350
Blue background indicates that the domain is not in the aligned region.

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