DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and Pax7

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:XP_006239325.1 Gene:Pax7 / 500574 RGDID:1564360 Length:505 Species:Rattus norvegicus


Alignment Length:181 Identity:68/181 - (37%)
Similarity:85/181 - (46%) Gaps:39/181 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   510 RRRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEKQLQK 574
            :||.|||||.|||.|||.||.::||||||.|||||:.|||.|||:||||.||||::|||....|.
  Rat   217 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQL 281

  Fly   575 ALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHHNTMNRYPQDLFQMGASSYPGMT----------- 628
            |....::|.               |:.|    ..|...|.  :|:..|:||..|           
  Rat   282 AAFNHLLPG---------------GFPP----TGMPTLPP--YQLPDSAYPTTTVSQDGGSTVHR 325

  Fly   629 -QPF--SMAHSTNMGSVGVRQDS---MGEFHGMSP-EDEWYNKSLSALRMN 672
             ||.  |..|...:.:.....||   .|..|..|. .|.:.|....:..||
  Rat   326 PQPLPPSTMHQGGLAAAAAAADSSSAYGARHSFSSYSDSFMNPGAPSNHMN 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 40/55 (73%)
Pax7XP_006239325.1 PAX 34..161 CDD:128645
Homeodomain 218..274 CDD:459649 40/55 (73%)
Pax7 <354..385 CDD:403540 6/23 (26%)
Blue background indicates that the domain is not in the aligned region.

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