DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and Abd-B

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster


Alignment Length:544 Identity:148/544 - (27%)
Similarity:201/544 - (36%) Gaps:185/544 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 QQQQQQQQQQQQ--QQQQQSGGNNPSNGSNSAVALSLAHPHAH---------ASHAHSSHAHGSH 163
            |||||||||:||  |:|||.              |...|.|||         .||.||:|.|   
  Fly     8 QQQQQQQQQEQQHLQEQQQH--------------LQQLHHHAHHHLPQPLHTTSHHHSAHPH--- 55

  Fly   164 AHALAIAHGHHGLLPSVVPQQQQQQQQQQQ----------QQQQQQQA------------QQLPP 206
                               .||||||||..          ||||||..            .:.||
  Fly    56 -------------------LQQQQQQQQHAVVASSPSSVLQQQQQQSTPTTHSTPTHAVMYEDPP 101

  Fly   207 GVGVASPLQQQQQQ-----QQQQQQQQQQQQQQQQLINN---GGVS-AGTPTLLIGNGPS----- 257
            .|    ||...|||     |||||.|||||||||||...   |.:| |.|||     |||     
  Fly   102 PV----PLVAVQQQHLPAPQQQQQLQQQQQQQQQQLATTPVAGALSPAQTPT-----GPSAQQQQ 157

  Fly   258 -------------------SSGAGTGSVSAAAAAAAAAAAASSSSSSLPHVAPHSLGLSPQSSAD 303
                               :|||.:..........||.|...:..     |||.:..:|| ||..
  Fly   158 HLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQI-----VAPTTASVSP-SSVS 216

  Fly   304 SQQFNIFPAIFSRQLNFSAGGQGGKLSMDELRPNLVGGLLGLQQGLLEDHASMQHGGVGQDTKFM 368
            ||:.:|..:|....|:..|...|.....|                        ....|.:.|...
  Fly   217 SQKEDINMSIQLAPLHIPAIRAGPGFETD------------------------TSAAVKRHTAHW 257

  Fly   369 SFQDQRL-MGIGGSHENRLLSLASSVQDTRSPI------------TTLEKSSSSSLNHQRKCSST 420
            ::.|:.. ...|..:.:|....|....:|:.|:            ||...::::.:|...:..|.
  Fly   258 AYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSA 322

  Fly   421 PEDFSALYSGLPTPGMDSSSHHHTPAHTPPSRLSDH---TISAEGAFKKLKPEPNSGLSTVSAGI 482
                :|..|...|    |:|.:..|.::.|..|..:   ..|:.||        :.|||..:.|.
  Fly   323 ----AARQSVEGT----STSSYEPPTYSSPGGLRGYPSENYSSSGA--------SGGLSVGAVGP 371

  Fly   483 TSPGSGLSSLSQHAGHTPTTASCPTPARRRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTT 547
            .:|..|   |.:..|....         |:.|..:::.|..|||..|..:.|.....|.||||..
  Fly   372 CTPNPG---LHEWTGQVSV---------RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNL 424

  Fly   548 KLNEARIQVWFQNRRAKYRKQEKQ 571
            :|.|.::::||||||.|.:|..::
  Fly   425 QLTERQVKIWFQNRRMKNKKNSQR 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 22/55 (40%)
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 22/55 (40%)

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