DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32532 and repo

DIOPT Version :9

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_477026.1 Gene:repo / 47285 FlyBaseID:FBgn0011701 Length:612 Species:Drosophila melanogaster


Alignment Length:626 Identity:138/626 - (22%)
Similarity:190/626 - (30%) Gaps:272/626 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 SGGAGGPGPGGGGGASGVVV-------VGGTSNSNNPAAAQQQQQQQQQQQQQQQQQSGGNNPSN 134
            :||.||.|.||.||:...|.       :|..|.|.........|:..:||||||           
  Fly    67 NGGGGGAGSGGAGGSPNYVTKLDFVNKMGCYSPSQKYEYISAPQKLVEQQQQQQ----------- 120

  Fly   135 GSNSAVALSLAHPHAHASHAHSSHAHGSHAHALAIAHGHHGLLPSVVPQQQQQQQQQQQQQQQQQ 199
                              |.|..|.|    :.......|:|:|        ..:|..||||||||
  Fly   121 ------------------HHHQHHQH----YTATPPPSHNGIL--------LHKQSSQQQQQQQQ 155

  Fly   200 QAQQLPPGVGVAS--PLQQQQQQQQQQQQQQQQQQQQQQLINNGGVSAGTPTLLIGNGPSSSGAG 262
            |.      ||:..  ||..:.......:.|.:.||.|.               |.|..|      
  Fly   156 QL------VGILDYHPLNGKLDYSSSPKDQYEPQQLQH---------------LYGGSP------ 193

  Fly   263 TGSVSAAAAAAAAAAAASSSSSSLPHVAPHSLGLSPQSSADSQQFNIFPAIFSRQLNFSAGGQGG 327
                                 ..|.|:...|.||...||         |.:      .:.|..||
  Fly   194 ---------------------HHLDHLDHGSDGLLQDSS---------PVM------INGGSAGG 222

  Fly   328 KLSMDELRPNLVGGLLGLQQGLLEDHASMQHGGVGQDTKFMSFQDQRLMGIGGSHENRLLSLASS 392
            ||.    :|:             |..:.::.||.|......|                    ::.
  Fly   223 KLK----KPD-------------EMCSQLEAGGAGVTPPSSS--------------------STV 250

  Fly   393 VQDTRSPITTLEKSSSSSLNHQRKCSSTPEDFSALYSGLPTPGMDSSSHHHTPAHTPPSRLSDHT 457
            |..|.:.......|||:.:..|....:.        .|:..|                      .
  Fly   251 VNGTTNGTGNANSSSSAGVGIQGAAGTA--------GGVAAP----------------------A 285

  Fly   458 ISAEGAFKKLKPEPNSGLSTVSAGITSPGSGLSSLSQHAGHTPTTASCPTPARRRHRTTFTQEQL 522
            ...:|:..|.|.:||        ||                          .:::.|||||..||
  Fly   286 AKKDGSSSKKKGDPN--------GI--------------------------KKKKTRTTFTAYQL 316

  Fly   523 AELEAAFAKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEKQLQK------------- 574
            .|||.||.::.|||::.|||||....|:|:|:||||||||||:||.|...:.             
  Fly   317 EELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHEPPRKTGYIKTSTPPTATL 381

  Fly   575 ---ALAP---------SVIPSCNGMMRNIQGY---------------------SVSRGYQPYPHH 606
               .|||         :|.|.  |.|.:...|                     :.|..|..|.|.
  Fly   382 NPGTLAPPFTSYPQTTTVTPP--GSMDSWTSYQTPYELTPQFSLLSPAASPYGTYSGQYGAYVHE 444

  Fly   607 NTMNRYPQDLFQMGASSYPGMTQPFSMAHSTNMGSVGVRQD 647
            :.:  :|...::.|:        |..|......|||....|
  Fly   445 SQL--FPMRHYEYGS--------PTRMEMGATTGSVAGNGD 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeobox 513..566 CDD:278475 33/52 (63%)
repoNP_477026.1 Homeobox 313..360 CDD:278475 28/46 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450869
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24329
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.940

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