Protein Alignment CG32532 and sv

DIOPT Version :10

• Sequence 1: NP_608318.5
• Gene: CG32532 / 32943
• FlyBaseID: FBgn0052532
• Length: 688
• Species: Drosophila melanogaster
• Sequence 2: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Alignment Length: 612
• Identity: 116/612 - (18%)
• Similarity: 190/612 - (31%)
• Gaps: 216/612 - (35%)

  Fly    62 HKLDFKHQSCAGG--------PGSGGAGGPGPGGGGGASGVVVVGGTSNSNNPAAAQQQQQQQQQ 118
            |:.....||..||        ..:|..|.|.|.....::..|      |:|..|:|...
  Fly   312 HQQHHVSQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANSV------NTNVSASASVH------ 364

  Fly   119 QQQQQQQQSGGNNPSNGSNSAVALSLAHPHAHA---SHAHSSHAHGSHAHA----LAIAHGHHGL 176
                      .:.|::|::| |.:|:.|.:|::   :|.:|:....:..::    |.|.||||..
  Fly   365 ----------ASIPTSGTDS-VQVSVGHINANSNETTHINSTAEQRTTGYSINGILGIQHGHHSH 418

  Fly   177 LPSVVPQQQQQQQQQQQQQQQQQQAQQLPPGVGVASPLQQQQQQQQQQQQQQQQ----------- 230
            ..:...........:...::::.:|........:.|.....::|:.......|.
  Fly   419 NNNNNSSVNNNNNTESSCKRKRIEAHDENHDTNIHSDNDDGKRQRMSTYSGDQLYTNIWSGKWCI 483

  Fly   231 QQQQQQLINNGGVSAGTPTLLIGNGP-----SSSGAGTGSVSAAAAAAA---------AAAAASS 281
            :...:.|...|.::|.|     ||.|     :|:|..|..:|.:.|.|:         :....|.
  Fly   484 KDDHKLLAELGNLTAST-----GNCPATYYEASNGFSTTPISGSGATASGNDTSMLYDSITTISQ 543

  Fly   282 SSSSL--PHVAPHSLG---LSP---------QSSADSQQFNIFPAIFSRQLNFSAGGQGGKLSMD 332
            :.||:  |.:.| |:|   |:|         :.||:|.|....|..:: .|.|    .|...||.
  Fly   544 TQSSIYTPAIGP-SIGTGSLTPLVPISMHEMKLSANSIQEQTVPPFYT-ALAF----DGNYTSMT 602

  Fly   333 ELR--PNLVGGLLGLQQGLLEDHASMQHGGVGQDTKFMSFQDQRLMGIGGSHENRLLSLAS---- 391
            .|.  .:|||          ::|..|..                     .|..|.|..:::
  Fly   603 SLENCSSLVG----------QEHIVMPE---------------------SSDSNTLCPISTRIVP 636

  Fly   392 SVQDTRS-----PITTLEKSSSSSLNHQRKCSSTPEDFSALYSGLPTPGMDSSSH------HH-- 443
            .:.:|.|     |:|..:..|..:.....|.:|:                .||.|      ||
  Fly   637 DITETNSTRVKEPLTNSDGCSEDNNKEPEKSNSS----------------QSSDHIASPHLHHIG 685

  Fly   444 -----------TPAHTPPSRLSDHTISAEGAFKKLKPEPNS-----------GLSTV-------- 478
                       ..|.|.||.|.....|...:...:.|..|.           ||.:.
  Fly   686 EEQLRGNRRSNLNASTHPSSLIPLQPSGGSSLLNINPSENRSDVELNLSNNVGLYSTPTVLPSFN 750

  Fly   479 --SAGITS--------------------------PGSGL--SSLSQHAGHT--PTTASCPTPARR 511
              |||.:|                          .||||  ||....:|.|  |.|....:|...
  Fly   751 HYSAGCSSVVPGSDYAYNPAYTQYGGAYGSYGYGTGSGLINSSYYYESGQTQSPLTHDLRSPLVA 815

  Fly   512 RHRTTFTQEQLAELEAAFAKSHYPDIY 538
            ....:..........:|..||...||:
  Fly   816 TRANSLASAASPGSGSACTKSESSDIF 842

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG32532	NP_608318.5	Homeodomain	511..567	CDD:459649	5/28 (18%)
sv	NP_524633.3	PAX	175..299	CDD:128645