DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and Ubx

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster


Alignment Length:625 Identity:123/625 - (19%)
Similarity:173/625 - (27%) Gaps:308/625 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ATSCALSTR--PLRSPKAPSHRHKIRSIKTGARSPRDSFQLDYSIDFFKTYIDTQRFYAGHKLDF 66
            |::.|.:.|  ||....:|...|.::  :|...||.|:   ..:....|.|.|....|....|:.
  Fly    33 ASAAAAAYRGFPLSLGMSPYANHHLQ--RTTQDSPYDA---SITAACNKIYGDGAGAYKQDCLNI 92

  Fly    67 KHQSCAG-------GPGSGGAGGPGPGGGGGASGVVVVGGTSNSNNPAAAQQQQQQQQQQQQQQQ 124
            |..:..|       |..:||.||.|.||||||.|   .||..|:|...||               
  Fly    93 KADAVNGYKDIWNTGGSNGGGGGGGGGGGGGAGG---TGGAGNANGGNAA--------------- 139

  Fly   125 QQSGGNNPSNGSNSAVALSLAHPHAH-------ASHAHSSHAHGSHAHALAIAHGHHGLLPSVVP 182
            ..:|.|||:.|  ..|..|...|.:.       :..:..||..||....::::.|:.        
  Fly   140 NANGQNNPAGG--MPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGNG-------- 194

  Fly   183 QQQQQQQQQQQQQQQQQQAQQLPPGVGVASPLQQQQQQQQQQQQQQQQQQQQQQLINNGGVSAGT 247
                                                                    |.|||.:|.
  Fly   195 --------------------------------------------------------NAGGVQSGV 203

  Fly   248 PTLLIGNGPSSSGAGTGSVSAAAAAAAAAAAASSSSSSLPHVAPHSL-------GLSPQSSADSQ 305
            ..           ||.|:...|....:.|||.::::|||...:.|:.       |..|:....| 
  Fly   204 GV-----------AGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPEDPTKS- 256

  Fly   306 QFNIFPAIFSRQLNFSAGGQGGKLSMDELRPNLVGGLLGLQQGLLEDHASMQHGGVGQDTKFMSF 370
                                       ::|.:|.                 |:||:..|      
  Fly   257 ---------------------------KIRSDLT-----------------QYGGISTD------ 271

  Fly   371 QDQRLMGIGGSHENRLLSLASSVQDTRSPITTLEKSSSSSLNHQRKCSSTPEDFSALYSGLPTPG 435
                 ||                           |..|.||..           |.|...|.|.|
  Fly   272 -----MG---------------------------KRYSESLAG-----------SLLPDWLGTNG 293

  Fly   436 MDSSSHHHTPAHTPPSRLSDHTISAEGAFKKLKPEPNSGLSTVSAGITSPGSGLSSLSQHAGHTP 500
            :                                                                
  Fly   294 L---------------------------------------------------------------- 294

  Fly   501 TTASCPTPARRRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKY 565
                     |||.|.|:|:.|..|||..|..:||.....|.|:|....|.|.:|::||||||.|.
  Fly   295 ---------RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKL 350

  Fly   566 RK----------QEK--QLQKALAPSVIPSCNGMMRNIQG 593
            :|          |||  |.|||.|.:...:.      :||
  Fly   351 KKEIQAIKELNEQEKQAQAQKAAAAAAAAAA------VQG 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 25/55 (45%)
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 25/55 (45%)

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