DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and Alx3

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_001007013.2 Gene:Alx3 / 365900 RGDID:1359270 Length:343 Species:Rattus norvegicus


Alignment Length:305 Identity:89/305 - (29%)
Similarity:120/305 - (39%) Gaps:100/305 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   445 PAHTPPSRLSD--------------------HTISAEGAFKKLKPE----PNSGLSTVSAGITSP 485
            ||..|...|.|                    ...|...:|.:|..:    |..|.|.|..   ||
  Rat    64 PAKPPAKYLQDLGPGPVLNGGHFYKGSSEAEEKASKAASFPQLPVDCRGGPRDGPSNVQG---SP 125

  Fly   486 GSGLSSLSQHAGHTPTTASCP--------TPARRRHRTTFTQEQLAELEAAFAKSHYPDIYCREE 542
            |..|:|||     .|.:...|        ...:||:||||:..||.|||..|.|:||||:|.||:
  Rat   126 GPCLASLS-----VPLSPGLPDSMELAKSKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQ 185

  Fly   543 LARTTKLNEARIQVWFQNRRAKYRKQEK--QLQKALAP-------SVIPSCNGMMRNIQGYSVSR 598
            ||..|.|.|||:||||||||||:||:|:  ::|:...|       ||:|..:.            
  Rat   186 LALRTDLTEARVQVWFQNRRAKWRKRERYGKIQEGRNPFTTAYDISVLPRTDS------------ 238

  Fly   599 GYQPYPHHNTMNRYPQDLFQMGASSYPG-------------MTQPFSMAHSTNMGSVGV-----R 645
                  |....|    .|:....|..||             ...|:|.:|....|.:||     .
  Rat   239 ------HPQLQN----SLWSSPGSGSPGGPCLMPPEGIPSPCMSPYSHSHGNVAGFMGVPASPAA 293

  Fly   646 QDSMGEFHGM-----------SPEDEWYNKSLSALRMNSSHHPNL 679
            ...:...||.           ||:.::.:.||.:|||.....|:|
  Rat   294 HPGIYSIHGFPPALGGHSFEPSPDGDYKSPSLVSLRMKPKEPPSL 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 37/55 (67%)
Alx3NP_001007013.2 Homeodomain 154..210 CDD:459649 37/55 (67%)

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