DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and prd

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster


Alignment Length:463 Identity:117/463 - (25%)
Similarity:163/463 - (35%) Gaps:143/463 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 PHSLGLS-PQSSADSQQFNIFPAIFSRQLNFSAGGQGGKLS----MDELRPNLVGG-----LLGL 345
            |:::.|. .:.:||    .|.|.:.||||..|.|.....|:    ...:||.::||     ....
  Fly    45 PNNIRLKIVEMAAD----GIRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRIATPE 105

  Fly   346 QQGLLEDHASMQHGGVGQDTKFMSFQDQRLMGIGGSHENRLLSLASSVQDTRSPITTLEKSSSSS 410
            .:..:|::.....|....:.:      ::|:..|....    |.|.||    |.|:.|.:...:.
  Fly   106 IENRIEEYKRSSPGMFSWEIR------EKLIREGVCDR----STAPSV----SAISRLVRGRDAP 156

  Fly   411 L-NHQRKCSSTPEDFSALYSGLPTPGMDSSSHHHTPAHTPPSRLSDHTISAEGAFKKLKPEPNSG 474
            | |.....|.:|.......|.  :.|.|.|..||.........:||           .:.||...
  Fly   157 LDNDMSSASGSPAGDGTKASS--SCGSDVSGGHHNNGKPSDEDISD-----------CESEPGIA 208

  Fly   475 LSTVSAGITSPGSGLSSLSQHAGHTPTTASCPTPARRRHRTTFTQEQLAELEAAFAKSHYPDIYC 539
            |..                               .:||.||||:..||.|||.||.::.|||||.
  Fly   209 LKR-------------------------------KQRRCRTTFSASQLDELERAFERTQYPDIYT 242

  Fly   540 REELARTTKLNEARIQVWFQNRRAKYRKQEKQLQ----------------KALAPSVIPSCNGMM 588
            |||||:.|.|.||||||||.||||:.|||...:.                .:..|||:.|...|.
  Fly   243 REELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGAPGGAAASVSHVAASSSLPSVVSSVPSMA 307

  Fly   589 -------------------------RNIQ--------GYSVSRGYQPYP--HHNTMNRYPQDLFQ 618
                                     .||.        ..::|.|....|  ||...|.      .
  Fly   308 PLAMMPGSLDPATVYQQQYDFYGSHANISVSAAAPMASSNLSPGITTTPPHHHQFYNP------S 366

  Fly   619 MGASSY-----PGMTQP----FSMAHSTNMGSVGVRQDSMGEFHGMSPEDEWYNKSLSALRMNSS 674
            ...:||     .|.|.|    ...::.|.:|||   ..:..|.|...|.:|..|:|:|:......
  Fly   367 ANTASYIMPGENGNTTPTGNIIVSSYETQLGSV---YGTETETHQTMPRNESPNESVSSAFGQLP 428

  Fly   675 HHPN-LSA 681
            ..|| |||
  Fly   429 PTPNSLSA 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 37/55 (67%)
prdNP_723721.1 PAX 27..154 CDD:238076 28/126 (22%)
Homeodomain 214..270 CDD:459649 37/55 (67%)

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