DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32532 and prrx1b

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:XP_017207930.1 Gene:prrx1b / 337089 ZFINID:ZDB-GENE-030131-9033 Length:267 Species:Danio rerio


Alignment Length:218 Identity:65/218 - (29%)
Similarity:99/218 - (45%) Gaps:36/218 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   482 ITSPG--SGLSSLSQHAGHTPTTASCPTPARRRHRTTFTQEQLAELEAAFAKSHYPDIYCREELA 544
            :.|||  || |..:|.......:.......:||:||||...||..||..|.::||||.:.||:||
Zfish    67 LESPGLTSG-SDTTQQENEQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLA 130

  Fly   545 RTTKLNEARIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQ----------------- 592
            |...|.|||:||||||||||:|:.|:.:..:...|::.|.:|.:..::                 
Zfish   131 RRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASLLKSYSGDVTAVEQPIVPRPAPRPNDYLSW 195

  Fly   593 GYSVSRGYQPYPHHNTMNRYPQDLFQMGASSYPGMTQPFSMAHSTNMGSVGVRQDSMGEFHGMSP 657
            |.:....:.|.|....| |.||.:  :...|....|.|.:.|::|:.             .||:.
Zfish   196 GSAAPYSWYPRPEGGPM-RVPQKM--LPTESNTMATYPPTCANTTST-------------QGMNM 244

  Fly   658 EDEWYNKSLSALRMNSSHHPNLS 680
            .:...|..|.|...|.:..|.::
Zfish   245 ANSIANLRLKAKEYNLNQVPTVN 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 34/55 (62%)
prrx1bXP_017207930.1 Homeodomain 101..153 CDD:459649 31/51 (61%)
OAR 242..259 CDD:461067 4/16 (25%)

Return to query results.
Submit another query.