DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and Vsx2

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_001284897.1 Gene:Vsx2 / 31469 FlyBaseID:FBgn0263512 Length:645 Species:Drosophila melanogaster


Alignment Length:426 Identity:102/426 - (23%)
Similarity:127/426 - (29%) Gaps:190/426 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 SHAHSSHAHGSHAHALAIAHGHHGLLPSVVPQQQQQQQQQQQQQQQQQQAQQLPPGVGVASPLQQ 216
            ::|..:.|..|.|.|....:...|.|.||...|||.|||||:||..|              |...
  Fly    48 TNATMATAATSAATAATPTNAAEGNLTSVSEPQQQPQQQQQEQQHHQ--------------PHHH 98

  Fly   217 QQQQQQQQQQQQQQQQQQQQLINNGGVSAGTPTLLIGNGPSSSGAGTGSVSAAAAAAAAAAAASS 281
            |.::..|...                                  |....::...|.||.|||   
  Fly    99 QYREHHQMTM----------------------------------AAASRMAYFNAHAAVAAA--- 126

  Fly   282 SSSSLPHVAPHSLGLSPQSSADSQQFNIFPAIFSRQLNFSAGGQGGKLSMDELRPNLVGGLLGLQ 346
                   ..||.|..:.......|.                          :..|:         
  Fly   127 -------FMPHQLAAAVHHHHQHQH--------------------------QHHPH--------- 149

  Fly   347 QGLLEDHASMQHGGVGQDTKFMSFQDQRLMGIGGSHENRLLSLASSVQDTRSPITTLEKSSSSSL 411
                 .|....||.||                                                 
  Fly   150 -----HHPHHPHGAVG------------------------------------------------- 160

  Fly   412 NHQRKCSSTPEDFSALYSGLPTPGMDSSSHHHTPAHTPPSRLSDHTISAEGAFKKLKPEPNSGLS 476
                              |.|.|......|.|.|.|.        .:.|:| |.:||.      .
  Fly   161 ------------------GPPPPPPMQHHHPHHPHHP--------LLHAQG-FPQLKS------F 192

  Fly   477 TVSAGITSPGS------GLSSLSQHAGHTPTTASCPTPARRRH-RTTFTQEQLAELEAAFAKSHY 534
            ...||...|||      |:.||:   |......|.....:||| ||.||..||.:||.||.::||
  Fly   193 AAGAGTCLPGSLAPKDFGMESLN---GFGVGPNSKKKKKKRRHSRTIFTSYQLEKLEEAFKEAHY 254

  Fly   535 PDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEK 570
            ||:|.||.|:..|:|.|.||||||||||||:||.||
  Fly   255 PDVYAREMLSLKTELPEDRIQVWFQNRRAKWRKTEK 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 36/56 (64%)
Vsx2NP_001284897.1 Homeodomain 230..287 CDD:459649 36/56 (64%)
OAR 556..572 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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