DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and hoxb1a

DIOPT Version :9

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_571190.2 Gene:hoxb1a / 30337 ZFINID:ZDB-GENE-990415-101 Length:316 Species:Danio rerio


Alignment Length:371 Identity:82/371 - (22%)
Similarity:115/371 - (30%) Gaps:149/371 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 PLQQQQQQQQQQQQQQQQQQQQQQLINNGGVSAGTPTLLIGNGPSSSGAGTGSVSAAAAAAAAAA 277
            |....|.|.|.......|.|.|                 .|.|.:..|.||.|....|.|.:   
Zfish    63 PTAAAQHQHQNGIYAHHQHQNQ-----------------TGMGLTYGGTGTTSYGTQACANS--- 107

  Fly   278 AASSSSSSLPHVAPHSLGLSPQSSADSQQFNIFPAIFSRQLNFSAGGQGGKLSMDELRP---NLV 339
                      ..|.|...::|:.  |...::            |:|     .|.....|   ::.
Zfish   108 ----------DYAQHQYFINPEQ--DGMYYH------------SSG-----FSTSNASPHYGSMA 143

  Fly   340 GGLLGLQQGLLEDHASMQHGGVGQDTKFMSFQDQRLMGIGGSHENRLLSLASSVQDTRSPITTLE 404
            |...| .||.:.......||..|||                                        
Zfish   144 GAYCG-AQGAVPAAPYQHHGCEGQD---------------------------------------- 167

  Fly   405 KSSSSSLNHQRKCS-STPEDFSALYSGLPTPGMDSSSHHHTPAHTPPSRLSDHTISAEGAFKKLK 468
                    |||..| .|..|.||      :.|.:..:.     ..||.:..|        :.|:|
Zfish   168 --------HQRAYSQGTYADLSA------SQGTEKDTD-----QPPPGKTFD--------WMKVK 205

  Fly   469 PEPNSGLSTVSAGITSPGSGLSSLSQHAGHTPTTASCPTPARRRHRTTFTQEQLAELEAAFAKSH 533
            ..|             |.:|  .::::......|.          ||.||.:||.|||..|..|.
Zfish   206 RNP-------------PKTG--KVAEYGLGPQNTI----------RTNFTTKQLTELEKEFHFSK 245

  Fly   534 YPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEKQLQKALAPS 579
            |.....|.|:|.|.:|||.::::||||||.|.:|:||:   .|||:
Zfish   246 YLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREKE---GLAPA 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeobox 513..566 CDD:278475 26/52 (50%)
hoxb1aNP_571190.2 Homeobox 226..278 CDD:278475 26/51 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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