DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32532 and Dlx3

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_001099302.1 Gene:Dlx3 / 287638 RGDID:1304875 Length:287 Species:Rattus norvegicus


Alignment Length:350 Identity:78/350 - (22%)
Similarity:129/350 - (36%) Gaps:125/350 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   378 IGGSHENRLLSLASSVQDTRS------PITTLEKSSSSSLNHQRKCSSTPEDFSALYSGLP-TPG 435
            :.||.:.:|.|:.:.:..:.|      ...||.:||.:.|.:.   |:...|:   |||.| ...
  Rat     1 MSGSFDRKLSSILTDISSSLSCHAGSKDSPTLPESSVTDLGYY---SAPQHDY---YSGQPYGQT 59

  Fly   436 MDSSSHHH---------TPAHTPPSRLSDHTISAE----GAFKK----------LKPEPNSGLST 477
            ::..::||         |.|::|.   |::|....    ||:::          :|.||.:.:..
  Rat    60 VNPYTYHHQFNLNGLAGTGAYSPK---SEYTYGGSYRQYGAYREQPLPAQDPVSVKEEPEAEVRM 121

  Fly   478 VSAGITSPGSGLSSLSQHAGHTPTTASCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYPDIYCRE 541
            |:.                          .|.: |:.||.::..|||.|:..|.|:.|..:..|.
  Rat   122 VNG--------------------------KPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERA 160

  Fly   542 ELARTTKLNEARIQVWFQNRRAKYRKQEKQ----LQKALAPSVIPSCNGMMRNIQGYSVSRGYQP 602
            |||....|.:.::::||||||:|::|..|.    |:.:...|...:||.              .|
  Rat   161 ELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNS--------------PP 211

  Fly   603 YPHHNTMNRYPQDLFQMGASSYPGMTQ-----PFSMAHSTNMGSVGVRQDSMGEFHGMSPEDEWY 662
            .|          .|:...:.|.|..|:     |...:.|.|              :...|.:.||
  Rat   212 SP----------ALWDTSSHSTPAPTRNPLPPPLPYSASPN--------------YLDDPTNSWY 252

  Fly   663 NKSLSALRMNSSHHPNLSAPMLQYQ 687
                        |..|||.|.||.|
  Rat   253 ------------HTQNLSGPHLQQQ 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 22/55 (40%)
Dlx3NP_001099302.1 DLL_N 27..107 CDD:463567 20/88 (23%)
COG5576 <109..230 CDD:227863 39/170 (23%)
Homeodomain 130..186 CDD:459649 22/55 (40%)

Return to query results.
Submit another query.