DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32532 and Otx1

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_037241.2 Gene:Otx1 / 25646 RGDID:3237 Length:355 Species:Rattus norvegicus


Alignment Length:264 Identity:69/264 - (26%)
Similarity:104/264 - (39%) Gaps:76/264 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   486 GSGLSSLSQHAGHTPTTASCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKL 549
            |.||:..:....| |:.....||.: ||.|||||:.||..|||.|||:.||||:.|||:|....|
  Rat    14 GLGLAGPAMDLLH-PSVGYPATPRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINL 77

  Fly   550 NEARIQVWFQNRRAKYRKQE--------KQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQP---- 602
            .|:|:||||:|||||.|:|:        :.::|..:|         :|...|...|..:.|    
  Rat    78 PESRVQVWFKNRRAKCRQQQQSGNGTKSRPVKKKSSP---------VRESSGSESSGQFTPPAVS 133

  Fly   603 -----YPHHNTMNRYPQDLFQMGASSYP-------------GMTQPFSMAHSTNMGSVGVRQD-- 647
                 ....::.:..|......|....|             .:..|.|::..:...||.|.:.  
  Rat   134 SSASSSSSASSASANPAAAAAAGLGGNPVAAASSLSTPTASSIWSPASISPGSAPASVSVPEPLG 198

  Fly   648 ---------------------------SMGEFHGM---SPEDEWY---NKSLSALRMNSSHHPNL 679
                                       ..|..:|.   :|...::   :.|.....|:|.|||:.
  Rat   199 APSNASCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPAPSSSYFGGVDCSSYLAPMHSHHHPHQ 263

  Fly   680 SAPM 683
            .:||
  Rat   264 LSPM 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 35/55 (64%)
Otx1NP_037241.2 Homeodomain 39..95 CDD:459649 35/55 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..144 9/60 (15%)
TF_Otx 178..274 CDD:427350 16/90 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..306 6/11 (55%)

Return to query results.
Submit another query.