DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32532 and Otx2

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_001273410.1 Gene:Otx2 / 18424 MGIID:97451 Length:297 Species:Mus musculus


Alignment Length:231 Identity:76/231 - (32%)
Similarity:104/231 - (45%) Gaps:50/231 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   463 AFKKLKPEPNSGLSTVSAGITSPGSGLSSLSQHAGHTPTTASCP--TPAR-RRHRTTFTQEQLAE 524
            ::.|..|...:|||..:       ||:..|....|:....||||  ||.: ||.|||||:.||..
Mouse     3 SYLKQPPYAVNGLSLTT-------SGMDLLHPSVGYPGPWASCPAATPRKQRRERTTFTRAQLDV 60

  Fly   525 LEAAFAKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMR 589
            |||.|||:.||||:.|||:|....|.|:|:||||:|||||.|:|::|.|           ||...
Mouse    61 LEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQ-----------NGGQN 114

  Fly   590 NIQGYSVSRGYQPYPHHNTMNRYPQDLFQMGASSYPGMTQPFSMAHSTNMGSVGVRQDSMGEFHG 654
            .:         :|....::..|        ..||..|.:..||...||::.::.         ..
Mouse   115 KV---------RPAKKKSSPAR--------EVSSESGTSGQFSPPSSTSVPTIA---------SS 153

  Fly   655 MSPEDEWYNKSLSALR---MNSSHHPNLSAPMLQYQ 687
            .:|...|...|:|.|.   ..||.....|.||...|
Mouse   154 SAPVSIWSPASISPLSDPLSTSSSCMQRSYPMTYTQ 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 35/55 (64%)
Otx2NP_001273410.1 Homeodomain 47..102 CDD:459649 35/54 (65%)
TF_Otx 161..242 CDD:427350 9/29 (31%)

Return to query results.
Submit another query.