DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and Hoxd9

DIOPT Version :9

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_038583.1 Gene:Hoxd9 / 15438 MGIID:96210 Length:339 Species:Mus musculus


Alignment Length:367 Identity:86/367 - (23%)
Similarity:128/367 - (34%) Gaps:122/367 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 IGNGPSSSGAGTGSVSAA-----------AAAAAAAAAASSSSSSLPHVAPHSLGLSPQSSADSQ 305
            :.:||:::.|...|.|.|           |.||...|||:.|....|:|:|     .|.::|:..
Mouse    42 VADGPAAATAEFASCSFAPKSSVFSASWSAVAAQPPAAATMSGLYHPYVSP-----PPLAAAEPG 101

  Fly   306 QF--------NIFPAIFSRQLNFSAGGQGGKLSMDELRPNLVGGLLGLQQGLLED---HASMQHG 359
            ::        ..||.        .|||.||.           ||..|...|.:..   .|:.:|.
Mouse   102 RYVRSWMEPLPGFPG--------GAGGGGGS-----------GGGGGGGPGPVPSPGGPANGRHY 147

  Fly   360 GVGQDTKFMSFQDQRLMGIGGSHENRLLSLASSVQDTRSPITTLEKSSSSSLNHQRKCSSTPE-- 422
            |:..:|             |.:......|.:||           ..:||||.:.:.:||:..|  
Mouse   148 GIKPET-------------GAAPAPAAASTSSS-----------SSTSSSSSSKRTECSAARESQ 188

  Fly   423 --------------DFSALYSGLPTPGMDSSSHHHTPAHTPPSRLSDHTISAEGAFKKLKPEPNS 473
                          |.:|..:| ..||:...:.......:.||..|||                 
Mouse   189 GSGGPEFPCNSFLRDKAAAATG-NGPGVGIGTGPGAVGSSEPSACSDH----------------- 235

  Fly   474 GLSTVSAGITSPGSGLSSLSQHAGHTPTTASCP-TPA--------RRRHRTTFTQEQLAELEAAF 529
                     .|||..|....:.....|.....| .||        .|:.|..:|:.|..|||..|
Mouse   236 ---------PSPGCSLKEEEKQPPQPPQQQLDPNNPAANWIHARSTRKKRCPYTKYQTLELEKEF 291

  Fly   530 AKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEKQ 571
            ..:.|.....|.|:||...|.|.::::||||||.|.:|..|:
Mouse   292 LFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMSKE 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeobox 513..566 CDD:278475 21/52 (40%)
Hoxd9NP_038583.1 Hox9_act 1..>153 CDD:282473 32/134 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..198 26/126 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..263 13/77 (17%)
HOX 272..324 CDD:197696 19/51 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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