DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and Hoxc4

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_038581.2 Gene:Hoxc4 / 15423 MGIID:96195 Length:264 Species:Mus musculus


Alignment Length:201 Identity:52/201 - (25%)
Similarity:79/201 - (39%) Gaps:64/201 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 QRKCSSTPEDFSALYSGLPTPGMDSSSH------HHTPAHTPPSRLSDHTISAEGAFKKLKPEPN 472
            |..|:|           |..|| :|.:|      ||.|..:.|               ..:|.|.
Mouse    66 QYSCTS-----------LQGPG-NSRAHGPAQAGHHHPEKSQP---------------LCEPAPL 103

  Fly   473 SGLSTVSAGITSPGSGLSSLSQHAGHTPTTASCPTP---------------------ARRRHRTT 516
            ||.|      .||.....:.||.|...|::|:...|                     ..:|.||.
Mouse   104 SGTS------ASPSPAPPACSQPAPDHPSSAASKQPIVYPWMKKIHVSTVNPNYNGGEPKRSRTA 162

  Fly   517 FTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEK----QLQKALA 577
            :|::|:.|||..|..:.|.....|.|:|.:..|:|.:|::||||||.|::|..:    :::.|..
Mouse   163 YTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTKVRSAPP 227

  Fly   578 PSVIPS 583
            ....||
Mouse   228 AGAAPS 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 23/55 (42%)
Hoxc4NP_038581.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..130 24/96 (25%)
Antp-type hexapeptide 135..140 0/4 (0%)
Homeodomain 157..213 CDD:459649 23/55 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..264 3/20 (15%)

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