DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and Vsx2

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_001288356.1 Gene:Vsx2 / 12677 MGIID:88401 Length:380 Species:Mus musculus


Alignment Length:459 Identity:109/459 - (23%)
Similarity:147/459 - (32%) Gaps:170/459 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 TGSVSAAAAAAAAAAAASSSSSSLPHVAPHSLGLSPQSSADSQQFNIFPAIFSRQLNFSAGGQGG 327
            ||....|.:...:...|.|:|...|              |....|.|...:   .||........
Mouse     2 TGKAGEALSKPKSETVAKSTSGGAP--------------ARCTGFGIQEIL---GLNKEPPSSHP 49

  Fly   328 KLSMDELRPNLVGGLLGLQQGLLEDHASMQHGGVGQDTKFMSFQDQRLMGIGG----SHENRLLS 388
            :.::|.|.|.          .||...:.:...|||         ...|:|.||    ..:...|.
Mouse    50 RAALDGLAPG----------HLLAARSVLSPAGVG---------SMGLLGPGGLPGFYTQPTFLE 95

  Fly   389 LASSVQDTR-SPITTLEKSSSSSLNHQRKCSSTPEDFSALYSGLPTPGMDSSSHHHTPAHTPPSR 452
            :.|..|... .|:    ..:|..|:..:..||..||.|:                          
Mouse    96 VLSDPQSVHLQPL----GRASGPLDTSQTASSDSEDVSS-------------------------- 130

  Fly   453 LSDHTI--SAEGAFKKLKPEPNSGLSTVSAGITSPGSGLSSLSQHAGHTPTTASCPTPARRRHRT 515
             ||..:  ||....||.|                                         :|||||
Mouse   131 -SDRKMSKSALNQTKKRK-----------------------------------------KRRHRT 153

  Fly   516 TFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEK---------- 570
            .||..||.|||.||.::||||:|.||.||..|:|.|.||||||||||||:||:||          
Mouse   154 IFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAE 218

  Fly   571 ----------------QLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHHNTMNRYPQDLFQM 619
                            .:.|:....::.||...:....|         :|...:...|.|....|
Mouse   219 YGLYGAMVRHSIPLPESILKSAKDGIMDSCAPWLLVQDG---------FPRRFSKPEYQQFFLGM 274

  Fly   620 GASSYPGMTQPFSMAHSTNMGSVGVRQ-----DSMGEFHGMSPE-------DEWYNKSLSALRMN 672
            ...|..      :.|.|.....| .||     |.| |....:||       :|....|::|||..
Mouse   275 HKKSLE------AAAESGRKPEV-ERQALPKLDKM-EQEERAPEAQAAISQEELRENSIAALRAK 331

  Fly   673 SSHH 676
            :..|
Mouse   332 AQEH 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 38/55 (69%)
Vsx2NP_001288356.1 Homeodomain 153..205 CDD:459649 34/51 (67%)
OAR 319..337 CDD:461067 6/17 (35%)

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