DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32532 and Cdx4

DIOPT Version :9

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_031700.1 Gene:Cdx4 / 12592 MGIID:88362 Length:282 Species:Mus musculus


Alignment Length:388 Identity:82/388 - (21%)
Similarity:128/388 - (32%) Gaps:144/388 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 LINNGGVSAGTPTLLIGNGPSSSGAGT--GSVSAAAAAAAAAAAASSSSSSLPHVA---PHSLGL 296
            |....|:..|  ||....|.|::|.||  ||.|...|:...||.........||::   ||...|
Mouse     7 LEKEAGMYPG--TLRSPGGSSTAGVGTSGGSGSPLPASNFTAAPVYPHYVGYPHMSNMDPHGPSL 69

  Fly   297 SPQSSADS---QQFNIFPAIFSRQLNFSAGGQGGKLSMDELRPNLVGGLLGLQQGLLEDHASMQH 358
            ...||..|   :.::.:|.                      .|:.:|.:                
Mouse    70 GAWSSPYSPPREDWSTYPG----------------------PPSTMGTV---------------- 96

  Fly   359 GGVGQDTKFMSFQDQRLMGIGGSHENRLLSLASSVQDTRSPITTLEKSSSSSLNHQRKCSSTPED 423
                                             .:.|..||:                 ..:| |
Mouse    97 ---------------------------------PMNDMTSPV-----------------FGSP-D 110

  Fly   424 FSALYSGLPTPGMDSSSHHHTPAHTPPSRLSDHTISAEGAFKKLKPEPNSGLSTVSAGITSPGSG 488
            :|.|.   ||.|..:..       :.|...|:..:|.:..        .||.::.|....||.:.
Mouse   111 YSTLG---PTSGASNGG-------SLPDAASESLVSLDSG--------TSGATSPSRSRHSPYAW 157

  Fly   489 LSSLSQHAGHTPTTASCPTPARRRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEAR 553
            :....|..|.|.|        :.::|..:|..|..|||..|..:.|..|..:.|||....|:|.:
Mouse   158 MRKTVQVTGKTRT--------KEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQ 214

  Fly   554 IQVWFQNRRAKYRKQ-EKQLQK-------------ALAPSVIPSCNGMMRNIQGYSVSRGYQP 602
            :::||||||||.||. :|::.:             :::|..:|  |.....   .|..||:||
Mouse   215 VKIWFQNRRAKERKMIKKKISQFENTGGSVQSDSGSISPGELP--NAFFTT---PSAVRGFQP 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeobox 513..566 CDD:278475 22/52 (42%)
Cdx4NP_031700.1 Caudal_act 13..160 CDD:309740 43/255 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 13..36 9/24 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 98..156 18/93 (19%)
Homeobox 175..227 CDD:306543 22/51 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.