DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and Cdx2

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_031699.2 Gene:Cdx2 / 12591 MGIID:88361 Length:311 Species:Mus musculus


Alignment Length:327 Identity:80/327 - (24%)
Similarity:119/327 - (36%) Gaps:92/327 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 ASMQHGGVGQDTKFMSF-QDQRLMGIGGSHENRLLSLASSVQDTRSPITTLEKSSSSSLNHQRKC 417
            :|::|.| |.:....:| ...:....||.|.....:..:::...:||..:...:..:.|.     
Mouse    16 SSVRHSG-GLNLAPQNFVSPPQYPDYGGYHVAAAAAATANLDSAQSPGPSWPTAYGAPLR----- 74

  Fly   418 SSTPEDFS---------------ALYSGLPTPGMDSSS------HHHTPAHTP------PSRLSD 455
                ||::               .|..|.|...|..||      ||| |.|.|      ||    
Mouse    75 ----EDWNGYAPGGAAAANAVAHGLNGGSPAAAMGYSSPAEYHAHHH-PHHHPHHPAASPS---- 130

  Fly   456 HTISAEGAFKKLKPEPNSGLSTVSAGITSPGSGLSSL--------SQHAGHTPTTASCPTPARRR 512
               .|.|..:.|...|....:|.:|...||.....:|        .|..|     :...|..:.:
Mouse   131 ---CASGLLQTLNLGPPGPAATAAAEQLSPSGQRRNLCEWMRKPAQQSLG-----SQVKTRTKDK 187

  Fly   513 HRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRK--------QE 569
            :|..:|..|..|||..|..|.|..|..:.|||.|..|:|.::::||||||||.||        |:
Mouse   188 YRVVYTDHQRLELEKEFHFSRYITIRRKSELAATLGLSERQVKIWFQNRRAKERKIKKKQQQQQQ 252

  Fly   570 KQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHHNTMNRYPQDLFQMGA------SSYPGMT 628
            :|.|:...|...||                 ||.|  ..:...|:.|..:.:      .|.||:.
Mouse   253 QQQQQPPQPPPQPS-----------------QPQP--GALRSVPEPLSPVTSLQGSVPGSVPGVL 298

  Fly   629 QP 630
            .|
Mouse   299 GP 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 24/55 (44%)
Cdx2NP_031699.2 Caudal_act 13..178 CDD:461413 38/184 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..151 13/47 (28%)
Interaction with DNA. /evidence=ECO:0000250|UniProtKB:Q99626 185..215 10/29 (34%)
Homeodomain 187..242 CDD:459649 24/54 (44%)
Interaction with 5-mCpG DNA. /evidence=ECO:0000250|UniProtKB:Q99626 227..241 8/13 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 239..311 18/81 (22%)
4S motif, modulates transactivation activity and protein stability. /evidence=ECO:0000269|PubMed:16027724 281..293 0/11 (0%)

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