DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32532 and Phox2a

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_446321.2 Gene:Phox2a / 116648 RGDID:621323 Length:281 Species:Rattus norvegicus


Alignment Length:174 Identity:69/174 - (39%)
Similarity:80/174 - (45%) Gaps:39/174 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   409 SSLNHQRKCSSTPE-----DFSAL-------YSGLPTPGMDSSSHHHTPAHTPPSRLSDHTISAE 461
            |.||....|.:..|     ||.|.       ||.| .|..        ||..||......:..|.
  Rat     4 SYLNSYDSCVAAMEASAYGDFGACSQPGGFQYSPL-RPAF--------PAAGPPCPALGSSNCAL 59

  Fly   462 GAFKKLKPEPNSGLSTVSAGITSPGSGLSSLSQHAGHTPTTASCPTPARRRHRTTFTQEQLAELE 526
            ||.:..:|.|   .|.|........|||....:               :||.|||||..||.|||
  Rat    60 GALRDHQPAP---YSAVPYKFFPEPSGLHEKRK---------------QRRIRTTFTSAQLKELE 106

  Fly   527 AAFAKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEK 570
            ..||::||||||.|||||....|.|||:||||||||||:||||:
  Rat   107 RVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 39/55 (71%)
Phox2aNP_446321.2 Homeodomain 91..147 CDD:459649 39/55 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..219 4/6 (67%)

Return to query results.
Submit another query.