DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and hoxa9

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:XP_031760007.1 Gene:hoxa9 / 116411596 XenbaseID:XB-GENE-481973 Length:261 Species:Xenopus tropicalis


Alignment Length:303 Identity:70/303 - (23%)
Similarity:98/303 - (32%) Gaps:84/303 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 PHVAPHSLGLSPQSSADSQQFNIFPAIF-SRQLNFSAGGQGGKLSMDELRPNLVGGLLGLQQGLL 350
            |..||.||...|:.:|.::..:..|..| |:...||:       ..:.|.|.....:..:.    
 Frog    26 PRFAPGSLTQPPRQAASAEHPDFTPCSFQSKTSVFSS-------PWNPLHPQTANNVSSVY---- 79

  Fly   351 EDHASMQHGGVGQDTKFMSFQDQRLMGIGGSHENRLLSLASSVQDTRSPITTLEKSSSSSLNHQR 415
              |..|.|      ...:|..|.|.|                    ||.:..:...|        
 Frog    80 --HPYMHH------QPPISASDGRYM--------------------RSWLDPMAAGS-------- 108

  Fly   416 KCSSTPEDFSALYSGLPTPGMDSS-SHHHTPAHTPPSRLSDHTISAEGAFKKLKPEPNSGLSTVS 479
                           ||.||..|| |:...|....|.|....|..:       :|.|.|.....|
 Frog   109 ---------------LPFPGFPSSRSYGIKPEPVAPRRGDCSTFDS-------RPLPVSDYPCGS 151

  Fly   480 AGITSPGSGLSSLSQHAGHTPTTASCP-----TPA--------RRRHRTTFTQEQLAELEAAFAK 531
            ........|....:...|..|:....|     .||        .|:.|..:|:.|..|||..|..
 Frog   152 PTDRDKQIGDPPFAVTNGENPSNGEKPPIDPNNPAANWLHARSTRKKRCPYTKHQTLELEKEFLF 216

  Fly   532 SHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEKQLQK 574
            :.|.....|.|:||...|.|.::::||||||.|.:|..|...|
 Frog   217 NMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRSK 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 22/55 (40%)
hoxa9XP_031760007.1 Hox9_act 1..182 CDD:461369 43/224 (19%)
Homeodomain 196..252 CDD:459649 22/55 (40%)

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