DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32532 and Pitx1

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_446076.1 Gene:Pitx1 / 113983 RGDID:69253 Length:315 Species:Rattus norvegicus


Alignment Length:298 Identity:85/298 - (28%)
Similarity:119/298 - (39%) Gaps:60/298 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   432 PTPGMDSSSHHHTPAHTPPSRLSDHTISAEGAFKKLKPEPNSGLSTV--SAGITSPGSGLSSLSQ 494
            |.|..|.....|. |.|...|......::|.:...|..:...|.:.|  ..|..|.|.|      
  Rat    21 PPPPHDMGPSFHL-ARTADPREPLENSASESSDADLPDKERGGEAKVPEDGGAGSAGCG------ 78

  Fly   495 HAGHTPTTASCPTPAR----RRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQ 555
                     |...||:    ||.||.||.:||.||||.|.::.|||:..|||:|..|.|.|.|::
  Rat    79 ---------SAEDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVR 134

  Fly   556 VWFQNRRAKYRKQEKQLQKALAP-SVIPSCNGMMRNIQGYSVSRGYQ----------PYP----- 604
            |||:|||||:||:|:..|..|.. ..:|..:|:::..:....:.||.          |.|     
  Rat   135 VWFKNRRAKWRKRERNQQLDLCKGGYVPQFSGLVQPYEDVYAAAGYSYNNWAAKSLAPAPLSTKS 199

  Fly   605 --HHNTMNRYPQDLFQMGASSYPGMTQPFSMAHSTNMGSVGVRQDSMGEFHG------MSPEDEW 661
              ..|:|:...........||...||.|.||...:..|......:::....|      |||....
  Rat   200 FTFFNSMSPLSSQSMFSAPSSISSMTMPSSMGPGSVPGMPNSGLNNINNLTGSSLNSAMSPGACP 264

  Fly   662 Y--------------NKSLSALRMNSSHHPNLSAPMLQ 685
            |              |.||::||:.|..|.:.....||
  Rat   265 YGTPASPYSVYRDTCNSSLASLRLKSKQHSSFGYGGLQ 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 32/55 (58%)
Pitx1NP_446076.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..103 26/97 (27%)
Homeodomain 90..146 CDD:459649 32/55 (58%)
Interaction with PIT-1. /evidence=ECO:0000250 149..280 23/130 (18%)
OAR 277..294 CDD:461067 6/16 (38%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 281..294 5/12 (42%)
Nuclear localization signal. /evidence=ECO:0000255 287..291 1/3 (33%)

Return to query results.
Submit another query.