DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32532 and Prrx2

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_001402085.1 Gene:Prrx2 / 113931 RGDID:1311471 Length:248 Species:Rattus norvegicus


Alignment Length:289 Identity:81/289 - (28%)
Similarity:115/289 - (39%) Gaps:102/289 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   417 CSSTPEDFSALY-------------SGLPTPGMDSSSHHHTPAHTPPSRLSDHTISAEGAFKKLK 468
            |:...::||..:             :..|.||             |.:|        |||.:   
  Rat    26 CAQARKNFSVSHLLDLEEVAAAGRRAAGPVPG-------------PEAR--------EGAAR--- 66

  Fly   469 PEPNSGLSTVSAGITSPGSGLSSLSQHAGHTPTTASCPTPA----------RRRHRTTFTQEQLA 523
             ||:.|               ||.|:.|   |....||:|.          :||:||||...||.
  Rat    67 -EPSGG---------------SSGSEAA---PQDGDCPSPGHGSATKRKKKQRRNRTTFNSSQLQ 112

  Fly   524 ELEAAFAKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMM 588
            .||..|.::||||.:.||||||...|:|||:||||||||||:|:.|:.:....:.|::.|..   
  Rat   113 ALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLATRSASLLKSYG--- 174

  Fly   589 RNIQGYSVSRGYQPYPHHNTMNRYPQDLFQMGASSYPGMTQPFSMAHSTNMGSVGVRQDSMGEFH 653
               |..::.:...|.|  .|::   .|.....|||......|:|..                   
  Rat   175 ---QEAAIEQPVAPRP--TTLS---PDYLSWPASSPYSSVPPYSPG------------------- 212

  Fly   654 GMSPEDEWYN--KSLSALRMN----SSHH 676
            |.||.....|  .|:::||:.    |.||
  Rat   213 GSSPATPGVNMANSIASLRLKAKEFSLHH 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 35/55 (64%)
Prrx2NP_001402085.1 Homeodomain 104..156 CDD:459649 32/51 (63%)
COG5576 <110..214 CDD:227863 43/133 (32%)
OAR 222..238 CDD:461067 4/15 (27%)

Return to query results.
Submit another query.