DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32532 and emx1l

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:XP_002936883.1 Gene:emx1l / 100101663 XenbaseID:XB-GENE-876649 Length:213 Species:Xenopus tropicalis


Alignment Length:163 Identity:50/163 - (30%)
Similarity:66/163 - (40%) Gaps:47/163 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   432 PTPGMDSSSHHHTPAHTPPSRLSDHTISAEGAFKKLKPEPNSGLSTVSAGITSPGSGLS-SLSQH 495
            |.||     |..||....|.      :...||.....|||           .:|..|.| .|.||
 Frog    34 PEPG-----HGLTPTPLRPG------VRLLGAPDLFFPEP-----------AAPPYGPSLGLPQH 76

  Fly   496 -AGHTPTTASCP------------TPAR-----------RRHRTTFTQEQLAELEAAFAKSHYPD 536
             ..|....:.||            ||..           :|.||.|:..||..||.||.|:||..
 Frog    77 RILHRDPLSFCPWILRHRLPGEENTPDNYLLHGPFSRKPKRIRTAFSPSQLLRLEGAFEKNHYVV 141

  Fly   537 IYCREELARTTKLNEARIQVWFQNRRAKYRKQE 569
            ...|::||.:..|.|.:::|||||||.|:::|:
 Frog   142 GAERKQLANSLCLTETQVKVWFQNRRTKHKRQK 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 26/55 (47%)
emx1lXP_002936883.1 Homeodomain 116..172 CDD:459649 26/55 (47%)

Return to query results.
Submit another query.