DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32532 and hoxb2

DIOPT Version :10

Sequence 1:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster
Sequence 2:XP_012808332.1 Gene:hoxb2 / 100038155 XenbaseID:XB-GENE-478525 Length:340 Species:Xenopus tropicalis


Alignment Length:228 Identity:57/228 - (25%)
Similarity:82/228 - (35%) Gaps:64/228 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   368 MSFQDQRLMGIGGSHENRLLSLASSVQDTRSPITTLEKSS--SSSLNHQRKCSSTPEDFSALYSG 430
            |:.:.:|.:|...|..    |||..:....:.:.|.:.||  .|:|        .|..|......
 Frog     1 MNLEFEREIGFINSQP----SLAECLTSFPAVLETFQTSSIKDSTL--------IPPPFEQTIPS 53

  Fly   431 LPTPGMDSSSHHHTPAHTPPSRLSDHTI--------------------SAEGAFKKLKPEPNS-- 473
            | .||.||.....:........|....:                    |::|:.:.|.|.|.|  
 Frog    54 L-NPGSDSQIRPKSQKRAENGLLQQPQVQPGHLATEFPWMKEKKSAKKSSQGSPQALIPPPESAG 117

  Fly   474 GLSTVSAGITSPGSGLSSLSQHAGHTPTTASCPTPARRRHRTTFTQEQLAELEAAFAKSHYPDIY 538
            |......|:...|.|                     .||.||.:|..||.|||..|   |:....
 Frog   118 GSPAEPPGLHDAGGG---------------------SRRLRTAYTNTQLLELEKEF---HFNKYL 158

  Fly   539 CRE---ELARTTKLNEARIQVWFQNRRAKYRKQ 568
            ||.   |:|....|.|.:::|||||||.|:::|
 Frog   159 CRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32532NP_608318.5 Homeodomain 511..567 CDD:459649 26/58 (45%)
hoxb2XP_012808332.1 Homeodomain 134..190 CDD:459649 26/58 (45%)

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