DRSC/TRiP Functional Genomics Resources

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Protein Alignment CoRest and Mier1

DIOPT Version :9

Sequence 1:NP_001188671.1 Gene:CoRest / 32941 FlyBaseID:FBgn0261573 Length:824 Species:Drosophila melanogaster
Sequence 2:XP_030109639.1 Gene:Mier1 / 71148 MGIID:1918398 Length:626 Species:Mus musculus


Alignment Length:424 Identity:92/424 - (21%)
Similarity:146/424 - (34%) Gaps:110/424 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NNSGHSGNANANEKTTTAVPGAGTPESSDDDNSTK------------RNGKSKAKQSEYEE---- 90
            :|||.||. |..|....:.......:||:||.|..            |..|.....||.||    
Mouse   219 DNSGCSGE-NKEENIKDSSGQEDETQSSNDDPSQSVTSQDAQEIIRPRRCKYFDTNSEIEEESEE 282

  Fly    91 ------------KIRVGRDYQAVCPPLVPEAERRPEQMNERALLVWSPTKEIPDLKLEEYISVAK 143
                        :|.||..:||..|..|...:...:.......|:|.| :.:|:.|:..::..|.
Mouse   283 DEDYIPSEDWKKEIMVGSMFQAEIPVGVCRYKENEKVYENDDQLLWDP-ECLPEEKVVVFLKDAS 346

  Fly   144 EKYG--------------YNGEQALGMLFWHKHDLERAVMDLA-NFTPFPDE---WTIEDKVLFE 190
            .:.|              .:.||||..|.....|.|.|:..|. |.....:|   ||.|:...||
Mouse   347 RRTGDEKGVEAIPEGSHIKDNEQALYELVKCSFDTEEALRRLRFNVKAAREELSVWTEEECRNFE 411

  Fly   191 QAFQFHGKSFHRIR-QMLPDKSIASLVKYYYSWKKTRHRSSAMDRQEKAIKAVVKDGSENGSEVG 254
            |..:.:||.||.|: ..:..:|:...|.:||.|||: .|.....:|.:.                
Mouse   412 QGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS-ERYDFFAQQTRF---------------- 459

  Fly   255 SNEESDNDDKKGHGTNSTINTIDATTTSTNNSTTNSNTTTPANIIANTINS------------NH 307
                    .||.:..:..:..........:.|..:|...:|....:|:.||            |.
Mouse   460 --------GKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKEDGAVSSRNQ 516

  Fly   308 SSSNSGGGGNINNNGEENIQAV------GGSN--TISNTSNNDMDAEQLSLFAGNAQIEEMMALG 364
            :..:|.|.|.|.|..|..::.:      ||:.  .:::...|..:|..|:.   :.::..|.|  
Mouse   517 NGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPLLTDMDTNGYEANNLTT---DPKLAHMTA-- 576

  Fly   365 LAADRAIGANGGNNNNNGEMGGDPGLMRRMVVGG 398
                       .|.|:..|....|...||:...|
Mouse   577 -----------RNENDFDEKNERPAKRRRINSSG 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CoRestNP_001188671.1 ELM2 92..144 CDD:279754 13/51 (25%)
SANT 179..225 CDD:197842 18/49 (37%)
SANT 180..224 CDD:304392 17/47 (36%)
SANT 540..582 CDD:238096
Mier1XP_030109639.1 ELM2 296..346 CDD:366648 12/50 (24%)
SANT_MTA3_like 402..446 CDD:212559 16/43 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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