DRSC/TRiP Functional Genomics Resources

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Protein Alignment CoRest and Zfp541

DIOPT Version :9

Sequence 1:NP_001188671.1 Gene:CoRest / 32941 FlyBaseID:FBgn0261573 Length:824 Species:Drosophila melanogaster
Sequence 2:NP_001092747.1 Gene:Zfp541 / 666528 MGIID:3647699 Length:1363 Species:Mus musculus


Alignment Length:234 Identity:67/234 - (28%)
Similarity:93/234 - (39%) Gaps:64/234 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 EEKIRVGRDYQAVCPPLVPEAERRPEQMNER-ALLVWSPTKEI---PDL--KLEEYISVAKEKY- 146
            |..|.||..:||..|.|   .||...:::|. |.|||.|..::   |:.  ::.|..:||.... 
Mouse  1062 EPHINVGSRFQAEIPEL---QERLLARVDENVASLVWKPWGDVMTNPETQDRVMELCNVACSSVM 1123

  Fly   147 ---GYNGEQALGMLFWHKHDLERAVM-----------------DLANFT-PFPDEWTIEDKVLFE 190
               |.|.|.||..|    ||.:.:|.                 .||::. ...|.||..:|.||:
Mouse  1124 PGGGTNLELALHCL----HDAQGSVQVALETLLLRGPQKPRTHPLADYRYTGSDIWTPMEKRLFK 1184

  Fly   191 QAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRHRSSAMDRQEKAIKAVVK--DGSENGSEV 253
            :||..|.|.|:.|.:|:..||:|..|:|||.|||                 :||  .|...|.|.
Mouse  1185 KAFCAHKKDFYLIHKMIQTKSVAQCVEYYYIWKK-----------------MVKFDCGRAPGLEK 1232

  Fly   254 GSNEESDNDDKKGHGTNSTINTIDATTTSTNNSTTNSNT 292
            ....|.|..::          |.|..|.|.....|:..|
Mouse  1233 RGRRELDEVER----------TEDKVTCSPRERPTHRPT 1261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CoRestNP_001188671.1 ELM2 92..144 CDD:279754 19/57 (33%)
SANT 179..225 CDD:197842 22/45 (49%)
SANT 180..224 CDD:304392 20/43 (47%)
SANT 540..582 CDD:238096
Zfp541NP_001092747.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
COG5236 <80..>329 CDD:227561
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 106..137
C2H2 Zn finger 142..162 CDD:275368
zf-C2H2 142..162 CDD:278523
zf-H2C2_2 154..179 CDD:290200
zf-C2H2_6 168..192 CDD:290623
C2H2 Zn finger 170..190 CDD:275368
C2H2 Zn finger 198..216 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..269
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..387
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 440..532
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 574..741
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 935..978
ELM2 1065..1120 CDD:279754 19/57 (33%)
SANT 1175..1219 CDD:197842 22/60 (37%)
SANT 1175..1218 CDD:304392 20/42 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1243..1298 6/29 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1343..1363
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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