DRSC/TRiP Functional Genomics Resources

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Protein Alignment CoRest and mier3b

DIOPT Version :9

Sequence 1:NP_001188671.1 Gene:CoRest / 32941 FlyBaseID:FBgn0261573 Length:824 Species:Drosophila melanogaster
Sequence 2:XP_005166936.1 Gene:mier3b / 567247 ZFINID:ZDB-GENE-070424-65 Length:538 Species:Danio rerio


Alignment Length:402 Identity:88/402 - (21%)
Similarity:153/402 - (38%) Gaps:99/402 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 EKTTTA----VPGAGTPESSDDDNSTKRNGKS--KAKQSEYEE----------KIRVGRDYQAVC 102
            |:|.::    .|...:.|::|....|.|:..:  ..|:||.||          :|.||..|||..
Zfish   119 EETQSSADDLTPSVTSHEATDFFPRTLRSNVTYDGDKESEGEEDGVNSEDSRKEIMVGSQYQAEV 183

  Fly   103 PPLVPEAERRPEQMNERALLVWSPTKEIPDLKLEEYISVA-----KEKYGY-------NGEQALG 155
            |..:.......:...|...|:|.| .|:.:.|:::|:..|     .::..|       :.||||.
Zfish   184 PAGLSHYNDDEKVYEEEDQLLWCP-DELSEYKVKDYLREALSQSTDDRTHYSTSEHIRDNEQALF 247

  Fly   156 MLFWHKHDLERA-VMDLANFTPFPDE---WTIEDKVLFEQAFQFHGKSFHRI-RQMLPDKSIASL 215
            .|....:|...| |...:|.....:|   |:.|:...||.|.|.:.|:||.| :..:..:::|..
Zfish   248 ELLKCNYDTREALVRYCSNVKTSKEESPPWSEEECRNFEHALQIYEKNFHLIQKHKVQTRTVAEC 312

  Fly   216 VKYYYSWKKT--------RHR------------SSAMDRQEKAIKAVVKDGSEN--GSEVGSNEE 258
            |.:||.|||:        ::|            :..|||.....:.:..|||..  .:..|...|
Zfish   313 VAFYYMWKKSERFDYFAQQNRFGKKKYSCYPGVTDLMDRLVDEAEGLAVDGSSPVCSAGAGGRLE 377

  Fly   259 SDNDDKKGHGTNSTINTIDATTTSTNNSTTNSNTTTPANIIANTINS------------------ 305
            :..:.:.|                ..||.|.|:.|..:|.:||..|.                  
Zfish   378 ASAEQQLG----------------LLNSITASDLTALSNSVANVCNGPAEMSCLDSPFFPPLESL 426

  Fly   306 -----NH----SSSNSGGGGNINNNGEENIQAVGGSNTISNTSNNDMDAEQLSLFAGNAQIEEMM 361
                 ||    |...:|.|..:|.......::..|..::.::.:.:..:::|.:....:.|.::.
Zfish   427 HRAALNHDDQLSYGTNGDGVCLNMLDSGFYRSDLGQLSMCSSKDCERPSKRLKMGLSESFINDVD 491

  Fly   362 ALGLAADRAIGA 373
            ..|..|.|..||
Zfish   492 FEGRRAHRITGA 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CoRestNP_001188671.1 ELM2 92..144 CDD:279754 15/56 (27%)
SANT 179..225 CDD:197842 17/49 (35%)
SANT 180..224 CDD:304392 16/47 (34%)
SANT 540..582 CDD:238096
mier3bXP_005166936.1 ELM2 173..224 CDD:279754 15/51 (29%)
SANT 282..321 CDD:304392 13/38 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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