DRSC/TRiP Functional Genomics Resources

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Protein Alignment CoRest and mier1b

DIOPT Version :9

Sequence 1:NP_001188671.1 Gene:CoRest / 32941 FlyBaseID:FBgn0261573 Length:824 Species:Drosophila melanogaster
Sequence 2:NP_001278272.1 Gene:mier1b / 566167 ZFINID:ZDB-GENE-070705-170 Length:494 Species:Danio rerio


Alignment Length:459 Identity:102/459 - (22%)
Similarity:173/459 - (37%) Gaps:123/459 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 AERNTTDVVR----NGRRSRGPSPNTHTTGG------VTNSASLVGSGNNSGHSGNANANEKTTT 58
            :.|:|.|:.:    ..:.|.|....:|:|..      ..|.|.|:.: .|.|:..|...:|    
Zfish   103 SSRSTGDLKKRQEDGAKVSTGIVKESHSTDSRACAVKACNKAELIRT-KNHGYFQNNEVDE---- 162

  Fly    59 AVPGAGTPESSDDDNSTKRNGKSKAKQSEYEEKIRVGRDYQAVCPP-LVPEAERRPEQMNERALL 122
                    ||.:||:        .....:::::|.||..|||..|. |....|......|:..||
Zfish   163 --------ESEEDDD--------YIPSEDWKKEIMVGSMYQAETPSGLCKYKENEKVYENDDQLL 211

  Fly   123 VWSPTKEIPDLKLEEYISVAKEKYG-YNGEQAL--GMLFWHKHDLERAVMDLANFTPFPDE---- 180
             |:| :.:|:..:.|:::.|..:.| ..|..|:  |.   |..|.|:|:.:|.......||    
Zfish   212 -WNP-QMLPENTVVEFLTDACRRTGEETGVDAIPEGS---HIKDNEQALYELVKCNFETDEALRR 271

  Fly   181 --------------WTIEDKVLFEQAFQFHGKSFHRIR-QMLPDKSIASLVKYYYSWKKTRHRSS 230
                          ||.|:...|||..:.:||.||.|: ..:..:|:...|.:||.|||: .|..
Zfish   272 LRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHFIQANKVRTRSVGDCVAFYYMWKKS-ERYD 335

  Fly   231 AMDRQEKAIKAVVKDGSENGSEVGSNEESDN--DDKKGHGTNSTINTIDATTTSTNNSTTNSNTT 293
            ...:|.:..|      .:.....|..:..|.  |:.:...::.....:.|.::|:..|.:....|
Zfish   336 FFAQQTRLGK------RKYNLHPGVTDYMDRLLDETESTASSRAATPLPAASSSSTTSQSEREET 394

  Fly   294 TPANIIANTINSNHSSSNSGGGGNINNNGE---ENIQAVGGSNTISNTSNNDMDAEQLSLFAGNA 355
            :..|.:     |:|||| :.|...::::.|   |::||.|....:.:|.:.|.:..:|:      
Zfish   395 SGHNGL-----SSHSSS-ADGIQTLSSDNEVKIESVQANGAPKHLLHTDHTDSNGVKLT------ 447

  Fly   356 QIEEMMALGLAADRAIGANGGNNNNNGEMGGDPGLMRRMVVGGFCKICNVVCHVLHDSPLGRMCK 420
            :|.                  |.|.||                      .|.|.|....|.|..|
Zfish   448 EIH------------------NTNRNG----------------------AVKHQLDCQSLERPAK 472

  Fly   421 SCHT 424
            .|.|
Zfish   473 KCRT 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CoRestNP_001188671.1 ELM2 92..144 CDD:279754 17/52 (33%)
SANT 179..225 CDD:197842 19/64 (30%)
SANT 180..224 CDD:304392 17/62 (27%)
SANT 540..582 CDD:238096
mier1bNP_001278272.1 ELM2 180..230 CDD:279754 16/51 (31%)
SANT 286..331 CDD:197842 17/44 (39%)
SANT_MTA3_like 286..330 CDD:212559 16/43 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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