DRSC/TRiP Functional Genomics Resources

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Protein Alignment CoRest and mideasb

DIOPT Version :9

Sequence 1:NP_001188671.1 Gene:CoRest / 32941 FlyBaseID:FBgn0261573 Length:824 Species:Drosophila melanogaster
Sequence 2:XP_009291493.1 Gene:mideasb / 560411 ZFINID:ZDB-GENE-131121-13 Length:1095 Species:Danio rerio


Alignment Length:415 Identity:93/415 - (22%)
Similarity:162/415 - (39%) Gaps:92/415 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 ANANEKTTTAVPGAGTPES---------SDDDNSTKRNGKSKAKQSEYEEKIRVGRDYQAVCPPL 105
            |.||.:   .:|...||:|         |.|......:..|:|.....|.:|.:|..|||.    
Zfish   682 AAANNQ---VLPPPATPKSATRSLLRSNSSDITPPVLSAISEATPVSIEPRINIGVRYQAE---- 739

  Fly   106 VPEAERRPEQMNE--RALLVWSPTKEIPDL--------KLEEYISVAKEKY----GYNGEQALGM 156
            |||...|...:::  :|.|||:|   :|||        |:.:.:.:|....    |.|.|.|:..
Zfish   740 VPELRERSAALHDLHKAELVWAP---LPDLEASAQQQQKVNDLMHLACSSALFGGGTNQELAMHC 801

  Fly   157 LFWHKHDLERAVMDL-------ANFTPF-------PDEWTIEDKVLFEQAFQFHGKSFHRIRQML 207
            |:..|.|:...:..|       :...|.       .|.||.|::.||.:....:.|.|..:::::
Zfish   802 LYECKGDIMGTLTHLLLKKNIFSKSHPLADYHYSGSDSWTPEERRLFNKGIATYKKDFFMVQKLV 866

  Fly   208 PDKSIASLVKYYYSWKKTRH--RSSAM---DRQEKAIKAVVKDGSENGS--EVGSNEESD----- 260
            ..|::|..|::||::||...  |:..:   :.:....|...::..:|.|  ::.|.:|.:     
Zfish   867 SSKTVAQCVEFYYTYKKQVKIGRNGTLVYGETEPLETKPTTEEEVDNKSSQKLESRKEDEESRKW 931

  Fly   261 -------NDDKKGHGTNS---TINTIDATTTSTNNSTTNSNT----------TTPANIIANTINS 305
                   .:|..|..|.|   |.|.......|..|||.:.:|          ..|:...::|...
Zfish   932 EGSCDRKQEDSPGRVTQSLQATENAAAVLVLSQENSTRHPSTLGVSHPPHPPQPPSKSRSDTAAR 996

  Fly   306 NHSSSNSGGGGNINNNGEENIQAVG------GSNTISNTSNNDMDAEQLSLFAGNAQIEEMMAL- 363
            ....||: |.|..|..||...:..|      .|.:....|:.:.:.:..:|....|:.....|| 
Zfish   997 KTGPSNT-GKGQTNQEGEFPCKKCGRIFYKVKSRSAHMKSHAEAEKKAAALRQREAEQRAAAALL 1060

  Fly   364 -----GLAADRAIGANGGNNNNNGE 383
                 |..||:..|....:::::.|
Zfish  1061 AAQQNGAMADQGRGRRASSDDSSDE 1085

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CoRestNP_001188671.1 ELM2 92..144 CDD:279754 19/61 (31%)
SANT 179..225 CDD:197842 14/45 (31%)
SANT 180..224 CDD:304392 12/43 (28%)
SANT 540..582 CDD:238096
mideasbXP_009291493.1 ELM2 730..785 CDD:279754 19/61 (31%)
SANT 838..883 CDD:197842 13/44 (30%)
SANT 839..883 CDD:304392 12/43 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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