DRSC/TRiP Functional Genomics Resources

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Protein Alignment CoRest and RCOR3

DIOPT Version :10

Sequence 1:NP_001188671.1 Gene:CoRest / 32941 FlyBaseID:FBgn0261573 Length:824 Species:Drosophila melanogaster
Sequence 2:NP_001336998.1 Gene:RCOR3 / 55758 HGNCID:25594 Length:585 Species:Homo sapiens


Alignment Length:689 Identity:200/689 - (29%)
Similarity:289/689 - (41%) Gaps:240/689 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GRRSRGP---SPNTHTTGGVTNSASLVGSGNNSGHSGNANANEKTTTAVPGAGTPESSDDDNSTK 76
            |...:||   ..|....|...:.|...|||.:| .:|..:.:|      |.:|.  ||||     
Human     3 GMMEKGPELLGKNRSANGSAKSPAGGGGSGASS-TNGGLHYSE------PESGC--SSDD----- 53

  Fly    77 RNGKSKAKQSEYEEKIRVGRDYQAVCPPLVPEAERR----------------PEQMNERA----- 120
                      |::..:|||.:|||..|...|...|.                |...::.|     
Human    54 ----------EHDVGMRVGAEYQARIPEFDPVETRSCYVSQAGLKLRGSSHPPSLASQSAGIIGA 108

  Fly   121 ----------LLVWSPTKEIPDLKLEEYISVAKEKYGYNGEQALGMLFWHKHDLERAVMDLANFT 175
                      :|||||...|||.||:|||::||||:|||.||||||||||||::|:::.||.|||
Human   109 TKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKEKHGYNVEQALGMLFWHKHNIEKSLADLPNFT 173

  Fly   176 PFPDEWTIEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRHRSSAMDRQEKAIK 240
            |||||||:||||||||||.|||||||||:||||||:|||||||||||||||.|:|.||||.:.: 
Human   174 PFPDEWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKL- 237

  Fly   241 AVVKDGSENGSEVGSNEESDNDDKKGHGTNSTINTIDATTTSTNNSTTNSNTTTPANIIANTINS 305
                        ...:.:.|:||             |...|                   :.::.
Human   238 ------------ANRHNQGDSDD-------------DVEET-------------------HPMDG 258

  Fly   306 NHSSSNSGGGGNINNNGEENIQAVGGSNTISNTSNNDMDAEQLSLFAGNAQIEEMMALGLAADRA 370
            |.|..:.........|.|:.:|          ||         .:..|..:.:.:.         
Human   259 NDSDYDPKKEAKKEGNTEQPVQ----------TS---------KIGLGRREYQSLQ--------- 295

  Fly   371 IGANGGNNNNNGEMGGDPGLMRRMVVGGFCKICNVVCHVLHDSPLGRMCKSCHTHWRRTGNRRPI 435
                                                                |.|          
Human   296 ----------------------------------------------------HRH---------- 298

  Fly   436 SGPEGNAPRRSTHNCAATADRSKRKPPKGMYINHDDLTALASCGN-PSLYLAERERKLTALMAEI 499
                        |     :.|||.:||||||:..:|:.|::...| .:..|.:.:.:|.:|..::
Human   299 ------------H-----SQRSKCRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQV 346

  Fly   500 QKNRQVMEQLDKECETINVDDVLSKPAAANTESAQPRISARWLPDEIQVALLAIREYGKNFPTIA 564
            |..:||...|.::.|. .:::.  ||..:|     .:|:|||..:|..:|:..:|:|||:|..||
Human   347 QNAKQVNSALKQKMEG-GIEEF--KPPESN-----QKINARWTTEEQLLAVQGVRKYGKDFQAIA 403

  Fly   565 KVVATKTEAHVRTFYLNNRRRYNLDQIVKEYEAGKSEESGAEEQTEPAVDAAAAGAATASAPSAA 629
            .|:..||...|:.|::|.|||:||:::::|:||    |.|.:             |:...|.:..
Human   404 DVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEA----EQGTQ-------------ASNGDASTLG 451

  Fly   630 DSTSAASATADRKQSTENSNNGVETMQESLPKKEDPKKP 668
            :.|.:||.....|.:.|..    |......|:...|..|
Human   452 EETKSASNVPSGKSTDEEE----EAQTPQAPRTLGPSPP 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CoRestNP_001188671.1 ELM2 92..144 CDD:460214 25/82 (30%)
SANT 180..224 CDD:473887 39/43 (91%)
Myb_DNA-binding 540..583 CDD:459731 17/42 (40%)
RCOR3NP_001336998.1 ELM2 59..142 CDD:460214 25/82 (30%)
SANT 178..222 CDD:473887 39/43 (91%)
Myb_DNA-binding 379..422 CDD:459731 17/42 (40%)

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