DRSC/TRiP Functional Genomics Resources

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Protein Alignment CoRest and F28F8.7

DIOPT Version :10

Sequence 1:NP_001188671.1 Gene:CoRest / 32941 FlyBaseID:FBgn0261573 Length:824 Species:Drosophila melanogaster
Sequence 2:NP_506874.1 Gene:F28F8.7 / 185072 WormBaseID:WBGene00009224 Length:464 Species:Caenorhabditis elegans


Alignment Length:389 Identity:72/389 - (18%)
Similarity:121/389 - (31%) Gaps:150/389 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 SSDDDNSTKRNGKSKA-------------------KQSE---YEEKIRVGRDYQAVCPPLV---- 106
            |||...|:|::||..:                   |.||   |.|. .|||::||...|..    
 Worm    86 SSDSVCSSKKSGKQASVDQVPPLLQRALCTKSRSPKNSENFLYLEN-AVGREHQAHVGPFKKLRG 149

  Fly   107 -PEAERRPEQMNERALLVWSPTKEIPDL---------------KLEEYISVAKEKYGYNGEQALG 155
             .|.|.|.|:|       |.|..:..:|               :.|.:|.:         |.||.
 Worm   150 RDEEEDRDERM-------WCPPDDDQNLDYDLLKNAYWRAIWRQFENHIPM---------EVALQ 198

  Fly   156 MLFWHKHDLERAVMDLANFTP----------------FPD--------------------EWTIE 184
            .|..:.:.:|:::..:....|                |.|                    .:.::
 Worm   199 WLMINDYSIEKSLDSIDQVLPDLPRAFQPLRVVQIERFKDALKKMKKGPILREIQKNCMPNYNLD 263

  Fly   185 DKVLFEQAFQFH-----GKSFHRIRQMLPDKSIASLVKYYYSWKKTRHRSSAMDRQEKAIKAVVK 244
            :...|..|||.|     .||.|....:..|      :::...|        |.....||:|..  
 Worm   264 EIHHFCHAFQHHIMEKTSKSCHCNEPLCED------LEFQPRW--------ACQNCNKALKYY-- 312

  Fly   245 DGSENGSEVGSNEESDNDDKKGHGTNSTINTIDATTTSTNNSTTNSNTTTPANIIANTINSNHSS 309
                         :...||.|       :..|.:|......:|..|..|..:...||.:.|.::.
 Worm   313 -------------DPIPDDTK-------LCLICSTYQGITGNTRPSKATVFSKEEANKVISWNTL 357

  Fly   310 SNSGGGGNINNNGEENIQAVGGSNTISNTSNNDMDAEQLSLFAGNAQIEEMMALGLAADRAIGA 373
            ..: ..|:::....|.|.|:         ..:::..|::.:...|..|..    .||.::.|.|
 Worm   358 MRT-SSGSLSREEFEKIYAL---------KRSELTKEEIEILGHNDNINR----HLAVEKRISA 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CoRestNP_001188671.1 ELM2 92..144 CDD:460214 16/71 (23%)
SANT 180..224 CDD:473887 10/48 (21%)
Myb_DNA-binding 540..583 CDD:459731
F28F8.7NP_506874.1 None
Blue background indicates that the domain is not in the aligned region.

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