DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CoRest and Rcor2

DIOPT Version :9

Sequence 1:NP_001188671.1 Gene:CoRest / 32941 FlyBaseID:FBgn0261573 Length:824 Species:Drosophila melanogaster
Sequence 2:XP_006526614.1 Gene:Rcor2 / 104383 MGIID:1859854 Length:532 Species:Mus musculus


Alignment Length:626 Identity:193/626 - (30%)
Similarity:275/626 - (43%) Gaps:192/626 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SGNANANEKTTTAVPGAGTPESSDDDNSTKRNGKSKAKQSEYEEKIRVGRDYQAVCPPLVPEAER 111
            :|:...:.......|..|.|.|.||.:..:.:....|.....:..||||.:||||.|...||:..
Mouse    10 AGSGILSRSRAKTAPNGGQPHSEDDSSEEEHSHVLTASPGSTDSMIRVGTNYQAVIPECKPESPA 74

  Fly   112 RPEQMNERALLVWSPTKEIPDLKLEEYISVAKEKYGYNGEQALGMLFWHKHDLERAVMDLANFTP 176
            |......:.:|||||...:.|.||::||::||||:|||.|||||||.|||||:|:::.|||||||
Mouse    75 RYSNKELKGMLVWSPNHCVSDAKLDKYIAMAKEKHGYNIEQALGMLLWHKHDVEKSLADLANFTP 139

  Fly   177 FPDEWTIEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRHRSSAMDRQEKAIKA 241
            ||||||:||||||||||.||||.|.||:||||||.|.|||||||||||||.|:|.||||.:.:. 
Mouse   140 FPDEWTVEDKVLFEQAFGFHGKCFQRIQQMLPDKVIPSLVKYYYSWKKTRSRTSVMDRQARRLG- 203

  Fly   242 VVKDGSENGSEVGSNEESDNDD-KKGHGTNSTINTIDATTTSTNNSTTNSNTTTPANIIANTINS 305
                        |..::.|:|: ::|.|..|                                  
Mouse   204 ------------GRKDKEDSDELEEGRGAVS---------------------------------- 222

  Fly   306 NHSSSNSGGGGNINNNGEENIQAVGGSNTISNTSNNDMDAEQLSLFAGNAQIEEMMALGLAADRA 370
                           .||.:.                                            
Mouse   223 ---------------EGEPDT-------------------------------------------- 228

  Fly   371 IGANGGNNNNNGEMGGDPGLMRRMVVGGFCKICNVVCHVLHDSPLGRMCKSCHTHWRRTGNRRPI 435
                           |||   :|              ..|...||               |.||.
Mouse   229 ---------------GDP---KR--------------EPLPSRPL---------------NARPG 246

  Fly   436 SGPEGNAPRRSTHNCAATADRSKRKPPKGMYINHDDLTALASCGNP---SLYLAERERKLTALMA 497
            .|.:.....:..|:..    |::|:||||||::.:.|||::  |:|   :|.|...:.:|.:|..
Mouse   247 PGKKEVQISQYRHHPL----RTRRRPPKGMYLSPEGLTAVS--GSPDLANLTLRGLDSQLISLKR 305

  Fly   498 EIQKNRQVMEQLDKECETINVDDVLSKPAAANTESAQPRISARWLPDEIQVALLAIREYGKNFPT 562
            ::|..:|....|.:..|. .:|.:  :|..|||     :.::||..||..:|:.|||.|||:|..
Mouse   306 QVQSMKQTNSSLRQALEG-GIDPL--RPPEANT-----KFNSRWTTDEQLLAVQAIRRYGKDFGA 362

  Fly   563 IAKVVATKTEAHVRTFYLNNRRRYNLDQIVKEYEAGKSEESGAEEQTEPAVDAAAAGAATASAPS 627
            ||:|:..||...|:||:::.|||:||:::::|:||   |:.||.....|..:|.......|:|..
Mouse   363 IAEVIGNKTLTQVKTFFVSYRRRFNLEEVLQEWEA---EQDGAPAAPVPTEEARRGAPVPATALE 424

  Fly   628 AADSTSAASATADRKQSTENSNNGVETMQESLPKKEDPKKP 668
            ..|.....|.:.                  |:|:...|..|
Mouse   425 EDDEVQITSVST------------------SVPRSVPPAPP 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CoRestNP_001188671.1 ELM2 92..144 CDD:279754 23/51 (45%)
SANT 179..225 CDD:197842 38/45 (84%)
SANT 180..224 CDD:304392 36/43 (84%)
SANT 540..582 CDD:238096 20/41 (49%)
Rcor2XP_006526614.1 ELM2 55..107 CDD:366648 23/51 (45%)
SANT 143..187 CDD:389774 36/43 (84%)
Myb_DNA-binding 340..383 CDD:365977 20/42 (48%)
PRK12323 <399..>531 CDD:237057 12/67 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850840
Domainoid 1 1.000 51 1.000 Domainoid score I11486
eggNOG 1 0.900 - - E1_KOG1194
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 299 1.000 Inparanoid score I2681
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D287298at33208
OrthoFinder 1 1.000 - - FOG0001182
OrthoInspector 1 1.000 - - otm43348
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16089
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3377
SonicParanoid 1 1.000 - - X1336
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.890

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