DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idh3a and IDH1

DIOPT Version :9

Sequence 1:NP_001259705.1 Gene:Idh3a / 32940 FlyBaseID:FBgn0027291 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_014361.1 Gene:IDH1 / 855691 SGDID:S000004982 Length:360 Species:Saccharomyces cerevisiae


Alignment Length:336 Identity:162/336 - (48%)
Similarity:231/336 - (68%) Gaps:9/336 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GTKKVTLIPGDGIGPEISAAVQKIFTAANVPIEWEAVDVTPVRGPDGKFGIPQAAIDSVNTNKIG 110
            |...||||||||:|.||:.:|:.||.|.|:||:||.::   ::..|.|.|:.: |::|:..||||
Yeast    27 GRFTVTLIPGDGVGKEITDSVRTIFEAENIPIDWETIN---IKQTDHKEGVYE-AVESLKRNKIG 87

  Fly   111 LKGPLMTPVGK-GHRSLNLALRKEFNLYANVRPCRSLEGYKTLYDDVDVVTIRENTEGEYSGIEH 174
            |||...||..: ||.|||:||||:.::||||...:||:|.||...|:|::.||||||||:||:||
Yeast    88 LKGLWHTPADQTGHGSLNVALRKQLDIYANVALFKSLKGVKTRIPDIDLIVIRENTEGEFSGLEH 152

  Fly   175 EIVDGVVQSIKLITEEASKRVAEYAFQYAKNNNRKKVTVVHKANIMRMSDGLFLRCVRDMAQK-F 238
            |.|.|||:|:|::|...::|:|.:||.:||..|||.||.|||||||::.||||...:.::.|| :
Yeast   153 ESVPGVVESLKVMTRPKTERIARFAFDFAKKYNRKSVTAVHKANIMKLGDGLFRNIITEIGQKEY 217

  Fly   239 PEIQFEEKYLDTVCLNMVQNPGKYDVLVMPNLYGDILSDMCAGLVGGLGLTPSGNMGLNGALFE- 302
            |:|......:|...:..|..|.::||||.|::||.||.::.|.|:||.||....|.|.:.|:|| 
Yeast   218 PDIDVSSIIVDNASMQAVAKPHQFDVLVTPSMYGTILGNIGAALIGGPGLVAGANFGRDYAVFEP 282

  Fly   303 -SVHGTAPDIAGKDLANPTALLLSAVMMLRHMELNTYADKIERAAFETIKEGKYLTGDLGGRAKC 366
             |.| ...||.|:::|||||::||:.:||.|:.||.||.:|.:|..|||.|||:.|.|:||.:..
Yeast   283 GSRH-VGLDIKGQNVANPTAMILSSTLMLNHLGLNEYATRISKAVHETIAEGKHTTRDIGGSSST 346

  Fly   367 SEFTNEICAKL 377
            ::|||||..||
Yeast   347 TDFTNEIINKL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3aNP_001259705.1 Iso_dh 46..377 CDD:294303 160/334 (48%)
IDH1NP_014361.1 mito_nad_idh 26..357 CDD:272942 160/334 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53770
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X402
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.