DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3a and LYS12

DIOPT Version :9

Sequence 1:NP_001259705.1 Gene:Idh3a / 32940 FlyBaseID:FBgn0027291 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_012172.1 Gene:LYS12 / 854714 SGDID:S000001356 Length:371 Species:Saccharomyces cerevisiae


Alignment Length:366 Identity:130/366 - (35%)
Similarity:201/366 - (54%) Gaps:33/366 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ATPAASRSYSSGTKKVTLIPGDGIGPEISAAVQKIFTAANVP--IEWEAVDVTPVRG-----PDG 92
            |:.||.:|.:.|     ||||||||.|:..|.:::....|..  :.:..:|:  ..|     ..|
Yeast    16 ASNAARKSLTIG-----LIPGDGIGKEVIPAGKQVLENLNSKHGLSFNFIDL--YAGFQTFQETG 73

  Fly    93 KFGIPQAAIDSVNTNKIG-LKGPLMTPVGK--GHRSLNLALRKEFNLYANVRPCRSLEGYKTLYD 154
            | .:|...:..:.....| |.|.:.:|..|  |:.|..:|||:|..|:|||||.:|:||.|.  .
Yeast    74 K-ALPDETVKVLKEQCQGALFGAVQSPTTKVEGYSSPIVALRREMGLFANVRPVKSVEGEKG--K 135

  Fly   155 DVDVVTIRENTEGEYSGIEHEIVD-----GVVQSIKLITEEASKRVAEYAFQYA----KNNNRKK 210
            .:|:|.:|||||..|..||...:|     .|..:.|.|:|.|::|:|..|...|    :...:..
Yeast   136 PIDMVIVRENTEDLYIKIEKTYIDKATGTRVADATKRISEIATRRIATIALDIALKRLQTRGQAT 200

  Fly   211 VTVVHKANIMRMSDGLFLRCVRDMAQ----KFPEIQFEEKYLDTVCLNMVQNPGKYDVLVMPNLY 271
            :||.||:|::..|||||....:::.:    |:.:|::.|:.:|::...:.:.|..:||:|.||||
Yeast   201 LTVTHKSNVLSQSDGLFREICKEVYESNKDKYGQIKYNEQIVDSMVYRLFREPQCFDVIVAPNLY 265

  Fly   272 GDILSDMCAGLVGGLGLTPSGNMGLNGALFESVHGTAPDIAGKDLANPTALLLSAVMMLRHMELN 336
            ||||||..|.|||.||:.||.|:|....:.|..||:|||||||.:|||.|.:.|..:||..:..|
Yeast   266 GDILSDGAAALVGSLGVVPSANVGPEIVIGEPCHGSAPDIAGKGIANPIATIRSTALMLEFLGHN 330

  Fly   337 TYADKIERAAFETIKEGKYLTGDLGGRAKCSEFTNEICAKL 377
            ..|..|.:|....::||...|.||||:|...:..:::.::|
Yeast   331 EAAQDIYKAVDANLREGSIKTPDLGGKASTQQVVDDVLSRL 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3aNP_001259705.1 Iso_dh 46..377 CDD:294303 125/353 (35%)
LYS12NP_012172.1 LeuB 21..371 CDD:223549 126/359 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S361
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100541
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X402
TreeFam 1 0.960 - -
76.620

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