DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3a and IDH2

DIOPT Version :9

Sequence 1:NP_001259705.1 Gene:Idh3a / 32940 FlyBaseID:FBgn0027291 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_014779.1 Gene:IDH2 / 854303 SGDID:S000005662 Length:369 Species:Saccharomyces cerevisiae


Alignment Length:359 Identity:194/359 - (54%)
Similarity:255/359 - (71%) Gaps:9/359 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 AVTATPAVSQVNATPAASRSYSSGTKKVTLIPGDGIGPEISAAVQKIFTAANVPIEWEAVDVTPV 87
            |....|::.:....|    :.|:|...|:.|.|||||||||.:|:|||:|||||||||:.||:|:
Yeast    16 ATVKQPSIGRYTGKP----NPSTGKYTVSFIEGDGIGPEISKSVKKIFSAANVPIEWESCDVSPI 76

  Fly    88 RGPDGKFGIPQAAIDSVNTNKIGLKGPLMTPVGKGHRSLNLALRKEFNLYANVRPCRSLEGYKTL 152
             ..:|...||..|:.|:..|.:.|||||.||:|||||||||.|||.|.|:|||||.:|:||:||.
Yeast    77 -FVNGLTTIPDPAVQSITKNLVALKGPLATPIGKGHRSLNLTLRKTFGLFANVRPAKSIEGFKTT 140

  Fly   153 YDDVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLITEEASKRVAEYAFQYAKNNNRKKVTVVHKA 217
            |::||:|.||||||||||||||.:..||||||||||.:||:||..|||:||:...|.:|.||||:
Yeast   141 YENVDLVLIRENTEGEYSGIEHIVCPGVVQSIKLITRDASERVIRYAFEYARAIGRPRVIVVHKS 205

  Fly   218 NIMRMSDGLFLRCVRDMAQKFPEIQFEEKYLDTVCLNMVQNPGKYD--VLVMPNLYGDILSDMCA 280
            .|.|::||||:...:::::::|::..|.:.:|...|.:|.||..|.  |.|.||||||||||:.:
Yeast   206 TIQRLADGLFVNVAKELSKEYPDLTLETELIDNSVLKVVTNPSAYTDAVSVCPNLYGDILSDLNS 270

  Fly   281 GL-VGGLGLTPSGNMGLNGALFESVHGTAPDIAGKDLANPTALLLSAVMMLRHMELNTYADKIER 344
            || .|.||||||.|:|...::||:|||:||||||:|.|||||||||:||||.||.|..:||:|:.
Yeast   271 GLSAGSLGLTPSANIGHKISIFEAVHGSAPDIAGQDKANPTALLLSSVMMLNHMGLTNHADQIQN 335

  Fly   345 AAFETIKEG-KYLTGDLGGRAKCSEFTNEICAKL 377
            |...||..| :..||||.|.|..|.||..:..:|
Yeast   336 AVLSTIASGPENRTGDLAGTATTSSFTEAVIKRL 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3aNP_001259705.1 Iso_dh 46..377 CDD:294303 189/334 (57%)
IDH2NP_014779.1 LeuB 34..369 CDD:223549 189/335 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346417
Domainoid 1 1.000 368 1.000 Domainoid score I120
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4037
Inparanoid 1 1.050 373 1.000 Inparanoid score I353
Isobase 1 0.950 - 0 Normalized mean entropy S361
OMA 1 1.010 - - QHG53770
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 1 1.000 - - otm46757
orthoMCL 1 0.900 - - OOG6_100541
Panther 1 1.100 - - LDO PTHR11835
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R586
SonicParanoid 1 1.000 - - X402
TreeFam 1 0.960 - -
1615.740

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