DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3a and IMD2

DIOPT Version :10

Sequence 1:NP_001259705.1 Gene:Idh3a / 32940 FlyBaseID:FBgn0027291 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_178171.1 Gene:IMD2 / 844395 AraportID:AT1G80560 Length:405 Species:Arabidopsis thaliana


Alignment Length:389 Identity:114/389 - (29%)
Similarity:193/389 - (49%) Gaps:59/389 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 AVSQVNATPAASRS--YSSGTKK--VTLIPGDGIGPEISAAVQKI-----------FTAANVPIE 78
            |||:.:..|...|.  .|.|.|:  :||:||||||||:.:..:.:           |....:||.
plant    20 AVSKQSLAPFRVRCAVASPGKKRYTITLLPGDGIGPEVVSIAKNVLQQAGSLEGVEFNFREMPIG 84

  Fly    79 WEAVDVTPVRGPDGKFGIPQAAIDSVNTNKIGLKGPLMTPVGKGHRSLN-----------LALRK 132
            ..|:|:..|       .:|:..|.:...:...|.|.:     .|::..|           |.:|.
plant    85 GAALDLVGV-------PLPEETISAAKESDAVLLGAI-----GGYKWDNNEKHLRPEKGLLQIRA 137

  Fly   133 EFNLYANVRPCRSLEGY-------KTLYDDVDVVTIRENTEGEY----SGIE-HEIVDGVVQSIK 185
            ...::||:||...|...       :.:.:.||::.:||.|.|.|    .||: :|..:.|..:.:
plant   138 ALKVFANLRPATVLPQLVDASTLKREVAEGVDLMVVRELTGGIYFGEPRGIKTNENGEEVGFNTE 202

  Fly   186 LITEEASKRVAEYAFQYAKNNNRKKVTVVHKANIMRMSDGLFLRCVRDMAQKFPEIQFEEKYLDT 250
            :.......|:|..||:.|: ..|.|:..|.|||::..|. |:.:.|..:|.::|:::....|:|.
plant   203 VYAAHEIDRIARVAFETAR-KRRGKLCSVDKANVLEASI-LWRKRVTALASEYPDVELSHMYVDN 265

  Fly   251 VCLNMVQNPGKYDVLVMPNLYGDILSDMCAGLVGGLGLTPSGNMGLNG-ALFESVHGTAPDIAGK 314
            ..:.:|::|.::|.:|..|::||||||..:.:.|.:|:.||.::..:| .|||.:||:||||||:
plant   266 AAMQLVRDPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLSDSGPGLFEPIHGSAPDIAGQ 330

  Fly   315 DLANPTALLLSAVMMLRH-MELNTYADKIERAAFETIKEGKYLTGDLGGRAK----CSEFTNEI 373
            |.|||.|.:|||.|:|:: :.....|.:||.|....:..| :.|||:.....    |.|...|:
plant   331 DKANPLATILSAAMLLKYGLGEEKAAKRIEDAVLVALNNG-FRTGDIYSAGTKLVGCKEMGEEV 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3aNP_001259705.1 Iso_dh 46..377 CDD:444908 108/370 (29%)
IMD2NP_178171.1 Iso_dh 1..405 CDD:444908 114/389 (29%)

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