DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3a and IDH-V

DIOPT Version :9

Sequence 1:NP_001259705.1 Gene:Idh3a / 32940 FlyBaseID:FBgn0027291 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_568113.1 Gene:IDH-V / 831884 AraportID:AT5G03290 Length:374 Species:Arabidopsis thaliana


Alignment Length:384 Identity:219/384 - (57%)
Similarity:283/384 - (73%) Gaps:19/384 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAARFIQKILNQLGLIAARDAPAVTATPAVSQVNATPAA----SRSYSSGTKKV--TLIPGDGIG 59
            |||...::::..            .:|..:..||::..|    :|::.|.|..:  ||.||||||
plant     3 MAANLARRLIGN------------RSTQILGAVNSSSGAASSVARAFCSSTTPITATLFPGDGIG 55

  Fly    60 PEISAAVQKIFTAANVPIEWEAVDVTPVRGPDGKFGIPQAAIDSVNTNKIGLKGPLMTPVGKGHR 124
            |||:.:|:|:||.|.||||||...|.....|..:..:...:::||..||:|||||:.||:|||||
plant    56 PEIAESVKKVFTTAGVPIEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHR 120

  Fly   125 SLNLALRKEFNLYANVRPCRSLEGYKTLYDDVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLITE 189
            ||||.||||.|||||||||.||.||||.|||||::||||||||||||:||::|.|||:|:|:||.
plant   121 SLNLTLRKELNLYANVRPCYSLPGYKTRYDDVDLITIRENTEGEYSGLEHQVVRGVVESLKIITR 185

  Fly   190 EASKRVAEYAFQYAKNNNRKKVTVVHKANIMRMSDGLFLRCVRDMAQKFPEIQFEEKYLDTVCLN 254
            :||.|||||||.|||.:.|::|:.:||||||:.:|||||:|.|::|:|:|||.:||..:|..|:.
plant   186 QASLRVAEYAFLYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMM 250

  Fly   255 MVQNPGKYDVLVMPNLYGDILSDMCAGLVGGLGLTPSGNMGLNG-ALFESVHGTAPDIAGKDLAN 318
            :|:||..:||||||||||||:||:|||||||||||||.|:|.:| ||.|:|||:|||||||:|||
plant   251 LVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEDGVALAEAVHGSAPDIAGKNLAN 315

  Fly   319 PTALLLSAVMMLRHMELNTYADKIERAAFETIKEGKYLTGDLGGRAKCSEFTNEICAKL 377
            |||||||.||||||::.|..|::|..|...||.||||.|.||||.:..:|||..||..|
plant   316 PTALLLSGVMMLRHLKFNEQAEQIHSAIINTIAEGKYRTADLGGSSTTTEFTKAICDHL 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3aNP_001259705.1 Iso_dh 46..377 CDD:294303 209/333 (63%)
IDH-VNP_568113.1 PLN00118 3..374 CDD:215062 218/382 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 426 1.000 Domainoid score I113
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4037
Inparanoid 1 1.050 434 1.000 Inparanoid score I415
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D868374at2759
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 1 1.000 - - mtm1151
orthoMCL 1 0.900 - - OOG6_100541
Panther 1 1.100 - - LDO PTHR11835
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X402
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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