DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3a and IDH1

DIOPT Version :9

Sequence 1:NP_001259705.1 Gene:Idh3a / 32940 FlyBaseID:FBgn0027291 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_195252.1 Gene:IDH1 / 829679 AraportID:AT4G35260 Length:367 Species:Arabidopsis thaliana


Alignment Length:353 Identity:163/353 - (46%)
Similarity:235/353 - (66%) Gaps:15/353 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QVNATPAASRSYSSGTKKVTLIPGDGIGPEISAAVQKIFTAANVPIEWEAVDVTPVRGPDGKFG- 95
            |..:.....|......:.|||||||||||.::.||:::..|.:.||.:|..||      .|:.. 
plant    22 QTRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTNAVEQVMEAMHAPIFFEKYDV------HGEMSR 80

  Fly    96 IPQAAIDSVNTNKIGLKGPLMTPVGKGHRSLNLALRKEFNLYANVRPCRSLEGYKTLYDDVDVVT 160
            :|...::|:..||:.|||.|.||||.|..|||:.||||.:|:|::..|.:|.|..|.:::||:|.
plant    81 VPPEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKELDLFASLVNCFNLPGLPTRHENVDIVV 145

  Fly   161 IRENTEGEYSGIEHEIVDGVVQSIKLITEEASKRVAEYAFQYAKNNNRKKVTVVHKANIMRMSDG 225
            |||||||||:|:|||:|.|||:|:|:||:..|:|:|:|||:||..|||||||.|||||||:::||
plant   146 IRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADG 210

  Fly   226 LFLRCVRDMAQKFPEIQFEEKYLDTVCLNMVQNPGKYDVLVMPNLYGDILSDMCAGLVGGLGLTP 290
            |||...|::|:|:|.|.:.|..:|..|:.:|..|.::||:|.|||||:::::..||:.||.|:.|
plant   211 LFLESCREVAKKYPSITYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMP 275

  Fly   291 SGNMGLNGALFESVHGTAPDIAGKD------LANPTALLLSAVMMLRHMELNTYADKIERAAFET 349
            .||:|.:.|:||  .|.:....|||      .|||.|||||:.|||||::..::||::|.|..:.
plant   276 GGNVGADHAVFE--QGASAGNVGKDKIVLENKANPVALLLSSAMMLRHLQFPSFADRLETAVKKV 338

  Fly   350 IKEGKYLTGDLGGRAKCSEFTNEICAKL 377
            |.|||..|.||||.:...|..:.:.|||
plant   339 IAEGKCRTKDLGGTSTTQEVVDAVIAKL 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3aNP_001259705.1 Iso_dh 46..377 CDD:294303 159/337 (47%)
IDH1NP_195252.1 PLN00123 8..367 CDD:215065 163/353 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D868374at2759
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.830

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