DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3a and idh1

DIOPT Version :9

Sequence 1:NP_001259705.1 Gene:Idh3a / 32940 FlyBaseID:FBgn0027291 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_594397.1 Gene:idh1 / 2541894 PomBaseID:SPAC11G7.03 Length:356 Species:Schizosaccharomyces pombe


Alignment Length:335 Identity:168/335 - (50%)
Similarity:222/335 - (66%) Gaps:3/335 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GTKKVTLIPGDGIGPEISAAVQKIFTAANVPIEWEAVDVTPVRGPDGKFG-IPQAAIDSVNTNKI 109
            |...||||||||||.|.|.||.:||..||||||:|.:|||.:...:...| ....||.|:..||:
pombe    19 GKYTVTLIPGDGIGRETSNAVTEIFKTANVPIEFEEIDVTGMEKNNKSSGDALHEAIQSLKRNKV 83

  Fly   110 GLKGPLMTPVGK-GHRSLNLALRKEFNLYANVRPCRSLEGYKTLYDDVDVVTIRENTEGEYSGIE 173
            ||||.|.||..| ||.|.|:|||||.::||::...:::.|:||.:|:||...|||||||||||:|
pombe    84 GLKGILFTPFEKGGHTSFNVALRKELDIYASLVLIKNIPGFKTRHDNVDFAIIRENTEGEYSGLE 148

  Fly   174 HEIVDGVVQSIKLITEEASKRVAEYAFQYAKNNNRKKVTVVHKANIMRMSDGLFLRCVRDMAQKF 238
            |:.|.|||:|:|:|||..|||:|::||.:|..|.||.||.:||||||:::||||.|...|:|..:
pombe   149 HQSVPGVVESLKIITEYKSKRIAQFAFDFALQNGRKSVTCIHKANIMKLADGLFRRTFYDVANGY 213

  Fly   239 PEIQFEEKYLDTVCLNMVQNPGKYDVLVMPNLYGDILSDMCAGLVGGLGLTPSGNMGLNGALFE- 302
            ..|..::..:|...:..|..|.::||||||||||.|||::.:.||||.|:.|..|.|.:.|||| 
pombe   214 DAITPKDLIVDNASMQAVSRPQQFDVLVMPNLYGSILSNIGSALVGGPGVIPGANFGRDYALFEP 278

  Fly   303 SVHGTAPDIAGKDLANPTALLLSAVMMLRHMELNTYADKIERAAFETIKEGKYLTGDLGGRAKCS 367
            ........|.|:..|||||.:|||.:||||:.|..|||.|..|.:..|:|||.||.||||.|...
pombe   279 GCRHVGLSITGRGEANPTAAILSACLMLRHLGLKDYADLINAATYSVIEEGKTLTKDLGGSASTG 343

  Fly   368 EFTNEICAKL 377
            :||:.|..::
pombe   344 DFTHAILERM 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3aNP_001259705.1 Iso_dh 46..377 CDD:294303 168/333 (50%)
idh1NP_594397.1 mito_nad_idh 18..353 CDD:272942 168/333 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53770
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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